Table 2 Pfcsp Global Diversity Statistics.

From: RTS,S/AS01 malaria vaccine mismatch observed among Plasmodium falciparum isolates from southern and central Africa and globally

Continent

Region

Country

n

h

S

K

Hd

π

Africa

  

2,635

370

33

4.11

0.948

0.117

East Africa

 

910

181

26

4.05

0.951

0.116

 

DRC

268

64

22

4.01

0.950

0.114

 

Malawi

534

150

25

3.99

0.951

0.114

 

Zambia

108

31

19

4.45

0.933

0.127

West Africa

 

1725

264

31

4.11

0.945

0.117

 

The Gambia

105

23

20

4.19

0.905

0.120

 

Ghana

1109

232

29

4.17

0.948

0.119

 

Guinea

175

49

21

3.94

0.939

0.112

 

Mali

166

53

24

3.84

0.935

0.110

 

Nigeria

7

4

6

2.95

0.857

0.084

 

Senegal

163

35

22

4.04

0.928

0.116

Asia

  

1,367

44

20

2.58

0.780

0.074

 

Bangladesh

80

20

15

2.54

0.859

0.072

 

Cambodia

752

23

17

2.66

0.807

0.076

 

Laos

129

11

13

2.68

0.799

0.077

 

Myanmar

81

6

9

0.65

0.349

0.019

 

Thailand

197

14

12

2.09

0.589

0.060

 

Vietnam

128

15

15

3.07

0.759

0.088

  1. Summarizes the samples included in the Pfcsp network analysis, including 193 samples sequenced in this study and 3,809 from Pf3k database. n = number of sequences, h = number of unique haplotypes, S = number of segregating sites (out of total possible 35), K = average number of pairwise nucleotide differences, Hd = haplotype diversity, π = nucleotide diversity.
Back to article page