Figure 5
From: Automated sorting of neuronal trees in fluorescent images of neuronal networks using NeuroTreeTracer
Tree extraction on a large tiled and stitched image. (a) Tiled and stitched confocal fluorescent image (MIP view) of a neuronal culture. Image size = 1894 × 1894 pixels (1 pixel = 0.28 × 0.28 μm). (b) Segmentation and soma detection. (c) Extraction of neuronal trees on a representative subregion (blue box). The algorithm is ignoring those cells whose soma is overlapping the box boundary.
