Figure 2 | Scientific Reports

Figure 2

From: Long non-coding RNAs involved in the regulatory network during porcine pre-implantation embryonic development and iPSC induction

Figure 2

Global profiling of the porcine pre-implantation embryo and iPSC transcriptome. (A) Hierarchical cluster analysis of known genes. WPGMA (Weighted Pair Group Method with Averaging) is used as the agglomeration method. AU (Approximately Unbiased) in red color represents p-value and BP (Bootstrap Probability) value in green color. AU p-value is computed by multiscale bootstrap resampling method. The prefixes PNM and PNT of embryonic samples represent porcine in vivo embryos and porcine somatic cell nuclear transfer (SCNT) embryo samples, respectively. (B) Principal component analysis (PCA) of the porcine pre-implantation embryo and iPSC transcriptome. PC1, PC2 and PC3 represent the top three dimensions of the contribution of gene expression among these samples, which account for 48.9%, 10.4% and 8.0%, respectively.

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