Table 1 Characteristics of identified SPL genes in H. vulgare.
From: Genome-wide analysis of the SPL/miR156 module and its interaction with the AP2/miR172 unit in barley
Genea | Gene symbolb | CDSc length (bp) | Domaind | Deduced protein (aa)e | Chf | Position on genomeg | Exonh |
|---|---|---|---|---|---|---|---|
HvSPL1 | HORVU7Hr1G042370 | 2526 | SBP, DEXDC, ANK | 841 | 7H | 122553615–122558679 | 10 |
HvSPL3 | HORVU6Hr1G019700 | 1524 | SBP | 507 | 6H | 53909817–53916886 | 5 |
HvSPL6 | HORVU5Hr1G117190 | 2895 | SBP, DEXDC, ANK | 964 | 5H | 650559269–650565702 | 11 |
HvSPL7 | HORVU2Hr1G097580 | 630 | SBP | 209 | 2H | 679640052–679642809 | 2 |
HvSPL7A | HORVU2Hr1G097610 | 612 | SBP | 203 | 2H | 679689970–679692277 | 2 |
HvSPL 8 | HORVU0Hr1G039150 | 1089 | SBP | 362 | Un | 248118980–248122768 | 3 |
HvSPL9 | HORVU1Hr1G060770 | 978 | SBP | 325 | 1H | 441051831–441063137 | 1 |
HvSPL11 | HORVU6Hr1G031450 | 981 | SBP | 326 | 6H | 133169150–133173306 | 4 |
HvSPL13 | HORVU2Hr1G048280 | 588 | SBP | 195 | 2H | 269391017–269400061 | 3 |
HvSPL15 | HORVU7Hr1G051400 | 3393 | SBP,DEXDC, ANK | 1130 | 7H | 192879289–192885430 | 10 |
HvSPL16 | HORVU5Hr1G076380 | 1179 | SBP | 392 | 5H | 551053196–551057389 | 3 |
HvSPL17 | HORVU5Hr1G073440 | 1251 | SBP | 416 | 5H | 539014598–539018210 | 3 |
HvSPL18 | HORVU0Hr1G039170 | 1203 | SBP | 400 | Un | 248141188–248147114 | 3 |
HvSPL 20 | HORVU7Hr1G110980 | 1350 | SBP | 449 | 7H | 631945657–631949862 | 3 |
HvSPL21 | HORVU6Hr1G030490 | 1476 | SBP | 491 | 6H | 127986525–127990179 | 3 |
HvSPL 22 | HORVU7Hr1G110950 | 339 | SBP | 112 | 7H | 631926981–631927880 | 1 |
HvSPL23 | HORVU3Hr1G094730 | 1290 | SBP | 429 | 3H | 647368957–647372642 | 3 |
