Table 1 List of candidate eRNA regions in response to RANKL stimulation.
SYMBOL | aannotation | gene strand | bdistance to TSS | FDR | cpermissive enhancer (FANTOM5) | |
|---|---|---|---|---|---|---|
+strand | −strand | |||||
Sbno2 | Promoter (2–3 kb) | − | −2769 | 8.93.E-09 | 9.12.E-59 | − |
Jdp2 | 3′ UTR | + | 38448 | 2.08.E-58 | 2.09.E-08 | − |
Nrp2 | Distal Intergenic | + | −11851 | 2.78.E-03 | 3.39.E-42 | − |
Egr2 | Promoter (2–3 kb) | + | −2178 | 1.59.E-19 | 4.39.E-02 | − |
Nfatc1 | Intron | − | 51979 | 8.21.E-10 | 2.92.E-14 | + |
Dcstamp | Distal Intergenic | + | −8165 | 4.62.E-12 | 3.90.E-03 | + |
Zbtb7a | Distal Intergenic | + | −7039 | 4.80.E-12 | 1.19.E-03 | − |
Fosl2 | Intron | + | −83707 | 2.00.E-07 | 3.40.E-10 | + |
Zbtb7a | Intron | + | 5049 | 1.66.E-08 | 1.31.E-03 | − |
Nrp2 | Distal Intergenic | + | −7217 | 3.64.E-08 | 1.44.E-02 | − |
Rap1b | Distal Intergenic | − | −21278 | 2.00.E-07 | 1.94.E-04 | + |
Acp5 | Promoter (<=1 kb) | − | 370 | 5.44.E-07 | 6.07.E-02 | − |
Fos | Distal Intergenic | + | 36547 | 3.33.E-04 | 2.14.E-05 | − |
Sema4d | Promoter (<=1 kb) | − | 579 | 6.92.E-05 | 2.11.E-02 | + |
Rnf19b | Intron | + | 9719 | 3.50.E-04 | 1.88.E-02 | − |
Nrp2 | Distal Intergenic | + | −24014 | 1.01.E-03 | 3.62.E-02 | − |
Ltbp1 | Intron | + | 93668 | 2.11.E-02 | 4.15.E-02 | − |
Fos | Distal Intergenic | + | 12780 | 3.22.E-02 | 3.91.E-02 | − |
