Figure 3
From: Paddy-upland rotation for sustainable agriculture with regards to diverse soil microbial community
Heatmap with relative abundance based on read counts of top 35 16S OTUs grouped using the Euclidean distance average linkage criteria among six soil types (R1.25.CF, R1.25.IF, R1.25.OF, R2.25.CF, R2.25.IF, and R2.25.OF). The abundance OTUs mainly clusters depending on the rotation system and subgroups IF and OF among the two systems. Some of these OTUs (i.e. Flavisolibacter and Sphingomonadales) are highly expressed in R2.25.CF, but rarely in R1.25.OF, and vice versa (i.e. Proteobacteria and Betaproteobacteria).
