Table 1 Statistics of transcriptome sequencing results.
From: Transcriptome analysis of two contrasting rice cultivars during alkaline stress
Sample | CD | CDT | WD | WDT |
|---|---|---|---|---|
Raw reads | 36040211 | 40164069 | 30489572 | 44115364 |
Clean reads | 34151831 | 38468190 | 29004291 | 42498490 |
Total mapped | 28376841 (83.09%) | 33323238 (86.63%) | 23726722 (81.80%) | 36027328(84.77%) |
Uniquely mapped | 27939733 (81.81%) | 32931934 (85.61) | 23366350(80.56) | 35567242 (83.69%) |
Multiple mapped | 437107 (1.28%) | 391304 (1.02%) | 360373 (1.24%) | 460086 (1.08%) |
Expressed gene | 21680 | 17220 | 19642 | 18993 |
Novel transcripts | 764 | 430 | 658 | 592 |
