Table 3 Nucleotide and amino-acid sequences of TCRβ CDR3 of E7/HLA-DR-bound CD4+ T cells with different HLA-DRB1 alleles.
PLF No. | TetramerA | Clones | VβB | CDR3 RegionC | JβD | AANE |
---|---|---|---|---|---|---|
2 | 1/2/3/4/9/10/11/12 | 40 | TACTTCTGT | GCCAGCAGTGGGGACAGGAACTCTTACGAGCAGTAC | TTCGGG | 12 |
YFC | ASSGDRNSYEQY | FG | ||||
3 | 1/2/3/4/9/10/11/12 | 40 | TACCTCTGT | GCCAGCAGGGGGGGGGGGCCAGAAGAGGACCAGTAC | TTCGGG | 12 |
YLC | ASRGGGPEEDQY | FG | ||||
4 | 1/2/3/4/9/10/11/12 | 40 | TACCTATGT | GCTGCCCAGTTCCACCTGCTGCACTCCAAG | TTCCAC | 10 |
YLC | AAQFHLLHSK | FH | ||||
5 | 1/2/3/10 | 20 | TATCTCTGC | AGCGTTGAAGGCCAGAGGAGGGTCCCCTCTTTC | TTTGGA | 11 |
YLC | SVEGQRRVPSF | FG | ||||
6 | 2/3/11/12 | 20 | TATTTCTGT | GCCAGCAGCTCGTCCAGCTTGAACACTGAAGCTTTC | TTTGGA | 12 |
YFC | ASSSSSLNTEAF | FG | ||||
7 | 1/9 | 10 | TATCTCTGC | AGCGTTGAAGGGCAGGGGGCTAGTGGCTACACC | TTCGGT | 11 |
YLC | SVEGQGASGYT | FG | ||||
8 | 10/12 | 10 | TATCTCTGC | AGGGTTGAAGATGGGACAGGGGGCCAGAGTGGCTACACC | TTCGGT | 13 |
YLC | SVEDGTGGQSGYT | FG | ||||
11 | 2/11/12 | 15 | TACTTCTGT | GCCAGCAGTGGGGACAGGAACTCCTACGAGCAGTAC | TTCGGG | 12 |
YFC | ASSGDRNSYEQY | FG | ||||
12 | 2 | 6 | TACCTCTGT | GCTGTGAATGAGGACACGGGCAGGAGAGCACTTACT | TTTGGG | 12 |
YLC | AVNEDTGRRALT | FG |