Table 3 Nucleotide and amino-acid sequences of TCRβ CDR3 of E7/HLA-DR-bound CD4+ T cells with different HLA-DRB1 alleles.

From: Mycobacterium tuberculosis peptide E7/HLA-DRB1 tetramers with different HLA-DR alleles bound CD4+ T cells might share identical CDR3 region

PLF No.

TetramerA

Clones

B

CDR3 RegionC

D

AANE

2

1/2/3/4/9/10/11/12

40

TACTTCTGT

GCCAGCAGTGGGGACAGGAACTCTTACGAGCAGTAC

TTCGGG

12

YFC

ASSGDRNSYEQY

FG

3

1/2/3/4/9/10/11/12

40

TACCTCTGT

GCCAGCAGGGGGGGGGGGCCAGAAGAGGACCAGTAC

TTCGGG

12

YLC

ASRGGGPEEDQY

FG

4

1/2/3/4/9/10/11/12

40

TACCTATGT

GCTGCCCAGTTCCACCTGCTGCACTCCAAG

TTCCAC

10

YLC

AAQFHLLHSK

FH

5

1/2/3/10

20

TATCTCTGC

AGCGTTGAAGGCCAGAGGAGGGTCCCCTCTTTC

TTTGGA

11

YLC

SVEGQRRVPSF

FG

6

2/3/11/12

20

TATTTCTGT

GCCAGCAGCTCGTCCAGCTTGAACACTGAAGCTTTC

TTTGGA

12

YFC

ASSSSSLNTEAF

FG

7

1/9

10

TATCTCTGC

AGCGTTGAAGGGCAGGGGGCTAGTGGCTACACC

TTCGGT

11

YLC

SVEGQGASGYT

FG

8

10/12

10

TATCTCTGC

AGGGTTGAAGATGGGACAGGGGGCCAGAGTGGCTACACC

TTCGGT

13

YLC

SVEDGTGGQSGYT

FG

11

2/11/12

15

TACTTCTGT

GCCAGCAGTGGGGACAGGAACTCCTACGAGCAGTAC

TTCGGG

12

YFC

ASSGDRNSYEQY

FG

12

2

6

TACCTCTGT

GCTGTGAATGAGGACACGGGCAGGAGAGCACTTACT

TTTGGG

12

YLC

AVNEDTGRRALT

FG

  1. ATetramers 1/2/3/4/9/10/11/12 were E7/HLA-DR tetramers with different HLA-DR alleles. BNucleotide and amino-acid sequences of V region terminal. CNucleotide and amino-acid sequencesof CDR3 region. DJoining nucleotide and amino-acid sequences. ECDR3 amino-acid sequences’ length.