Table 1 Recombination-intense viral groups.
From: Investigation of recombination-intense viral groups and their genes in the Earth’s virome
ID | Sample type | Host bacterial species | Nucleotide diversity | rmin (minimum number of recombinations)/nucleotide |
|---|---|---|---|---|
3050 | Oral (tongue dorsum) | Atopobium sp. ICM42b | 0.055 | 0.053 |
181 | Nasopharynx | Propionibacterium acnes | 0.048 | 0.050 |
2961 | Oral (tongue dorsum) | Streptococcus mitis | 0.065 | 0.051 |
4000 | Oral (tongue dorsum) | Atopobium sp. ICM42b | 0.055 | 0.041 |
3707 | Oral (tongue dorsum) | Atopobium sp. ICM42b | 0.057 | 0.036 |
3591 | Oral (supragingival plaque) | Actinomyces gerencseriae | 0.058 | 0.035 |
3319 | Oral (buccal mucosa) | Gemella haemolysans | 0.050 | 0.033 |
3549 | Oral (tongue dorsum) | Prevotella nanceiensis | 0.064 | 0.034 |
3189 | Oral (supragingival plaque) | Leptotrichia goodfellowii | 0.056 | 0.030 |
2890 | Oral (supragingival plaque) | Capnocytophaga granulosa | 0.057 | 0.034 |
2943 | Oral (tongue dorsum) | Campylobacter concisus | 0.068 | 0.030 |
3600 | Oral (attached/keratinized gingiva) | Gemella haemolysans | 0.060 | 0.030 |
3200 | Oral (buccal mucosa) | Streptococcus oligofermentans | 0.049 | 0.026 |
3358 | Oral (tongue dorsum) | Streptococcus gordonii | 0.047 | 0.025 |
4460 | Oral (tongue dorsum) | Atopobium sp. ICM42b | 0.056 | 0.027 |
3915 | Oral (buccal mucosa) | Gemella haemolysans | 0.040 | 0.023 |
3836 | Oral (tongue dorsum) | Oribacterium sinus | 0.069 | 0.028 |
3445 | Oral (buccal mucosa) | Streptococcus mitis | 0.053 | 0.025 |
2970 | Oral (supragingival plaque) | Capnocytophaga sp. CM59 | 0.055 | 0.031 |
2959 | Oral (buccal mucosa) | Actinomyces viscosus | 0.044 | 0.030 |
3184 | Oral (tongue dorsum) | Streptococcus mitis | 0.045 | 0.028 |
3776 | Oral (tongue dorsum) | Prevotella denticola | 0.052 | 0.021 |
2981 | Oral (tongue dorsum) | Lachnoanaerobaculum saburreum | 0.041 | 0.021 |
3576 | Oral (tongue dorsum) | Mogibacterium sp. CM50 | 0.045 | 0.020 |
4484 | Oral (tongue dorsum) | Lachnospiraceae bacterium oral taxon 082 | 0.084 | 0.029 |
