Figure 4
Heat maps of 17 differentially expressed genes with contrasted behavior during the infection process obtained from RNAseq data (A) and from real time quantitative RT-PCR (qPCR) (B). The contig identification number and the BLAST definition of these 17 genes are presented in the table (C). Three biological replicates were performed for each RT-qPCR validation; the results are expressed as means. The elongation factor one alpha (EF1æ) gene was used as internal control. All results are expressed as Log2 fold change. The color scale corresponding to the expression fold change is presented above panels (A and B). Clustering was performed with the MultiExperiment Viewer 4.8 by hierarchical clustering of all genes and samples using Manhattan distance calculations.
