Table 2 Core set of genes associated with ZIKV infection.

From: Determination of system level alterations in host transcriptome due to Zika virus (ZIKV) Infection in retinal pigment epithelium

Count

Genes

CTR. vs 48 h

CTR. vs 96 h

GSE78711: ZIKV vs Control

GSE80434: ZIKV vs Control

1

ABCG1

3.155899

2.700842

0.843469

0.866306

2

ACSL3

1.013566

0.764678

0.800761

0.639925

3

CNTNAP1

2.281215

2.567525

0.664535

NA

4

CRTC2

0.704273

0.742567

0.833569

0.657603

5

CRY2

0.806888

1.005142

1.16703

0.931144

6

DDX58

5.33619604

4.25348802

1.11938785

NA

7

DOCK6

0.858289

1.074292

0.673731

NA

8

ERO1LB

1.667181

1.981114

0.882149

NA

9

FGFR1OP2

0.767468

0.906054

1.122912

0.671026

10

HECA

1.350149

1.939809

0.644875

0.726024

11

ITSN2

0.830577

1.054781

0.64226

NA

12

MAPK13

1.04260181

1.23386765

0.78187322

NA

13

NYAP1

1.91449

2.587236

NA

0.675337

14

OPTN

1.698412

1.217579

0.785475

0.667869

15

PLCD1

0.846584

0.982816

1.035717

0.858286

16

PPP4R1L

1.867549

1.963953

0.884417

NA

17

PXK

0.702051

1.108064

0.626402

NA

18

RBM33

0.751085

1.223488

0.69828

0.756224

19

SAMD8

0.837704

0.898175

0.673724

0.942943

20

SAV1

0.699783

0.868429

0.676048

NA

21

SEC. 24 A

0.669308

0.987638

1.08315

0.695181

22

SELK

1.107179

1.105049

0.712049

NA

23

SERTAD2

0.626871

0.871817

0.852495

NA

24

SH2B3

1.639506

1.72369

0.818069

0.653227

25

SIX4

0.766001

0.748324

0.835927

NA

26

SLC39A14

0.68938006

0.7869344

0.89250974

NA

27

TNFRSF10B

0.71554352

0.77481712

0.63166014

NA

28

TNFRSF14

1.20932852

1.5514799

NA

3.38441121

29

TNFSF9

4.006927

3.932652

NA

1.050304

30

TOB1

0.630485

0.762722

0.795475

0.814034

31

TRIP10

0.865456

1.269987

0.648967

NA

32

TTBK2

1.10199

1.799349

0.586193

NA

33

TYW5

0.805578

1.135104

0.761662

NA

34

UGCG

0.775482

1.390899

0.679913

NA

35

ZBTB34

0.995701

1.377278

0.783028

NA

36

ALDH5A1

−1.37322

−1.31132

−0.6077

NA

37

ARMC6

−0.7201926

−1.3836757

−1.0511958

NA

38

CHML

−1.2564619

−1.9774371

−0.86302

−0.8436419

39

DANCR

−2.20872

−2.59023

−1.01555

−1.03214

40

PKI55

−1.42331

−2.10882

−0.99145

NA

41

RBM12

−0.6996687

−0.7303744

−0.961712

NA

42

RBM12

−0.69967

−0.73037

−0.96171

NA

43

UTP20

−0.84553

−1.31002

NA

−0.7852

  1. The table depicts log fold change in expression of genes because of ZIKV infection of primary RPE and neuronal progenitor cells.