Table 4 Comparison of select resources that provide mutation-disease associations extracted via text-mining.

From: DES-Mutation: System for Exploring Links of Mutations and Diseases

 

Topics

Online text-mining recourses

PolySearch

PubTator

Des-Mutation

Literature

Full-text (PMC)

+

−

+

Abstract (PubMed)

+

+

+

Biomedical entities

Mutations

SNPs

SNPs, Sub, Del, Ins, Dup, FS, InDels

SNPs, Sub, Del, Ins, Dup, FS, InDels

Genes

+

+

+

Diseases

+

+

+

Toxins

+

−

+

Drugs

+

+

+

Chemicals

+

+

+

Species

+

+

+

Proteins

+

+

+

Metabolites

+

−

+

Pathways

+

−

+

Organs/tissues

+

−

+

Taxonomies

+

−

+