Table 1 The number of differentially methylated positions (DMPs), differentially expressed genes (DEGs) and differentially expressed non-coding RNAs (ncRNAs) between groups.
From: DNA hypermethylation and differential gene expression associated with Klinefelter syndrome
DNA methylation data | KS vs. Male | KS vs. Female | Male vs. Female | ||||
|---|---|---|---|---|---|---|---|
Hyper | Hypo | Hyper | Hypo | Hyper | Hypo | ||
DMPs (FWER < 0.05, absolute delta-M-value > 1) | X chr | — | — | 10 | 1 | — | — |
145 | 23 | 454 | 617 | 325 | 162 | ||
RNA-Seq data | KS vs. Male | KS vs. Female | Male vs. Female | ||||
Up | Down | Up | Down | Up | Down | ||
DEGs (FDR < 0.05, absolute logFC ≥0.3) | X chr | 20 | 1 | 28 | 34 | 36 | 51 |
Autosomal | 20 | 11 | 620 | 1182 | 721 | 1189 | |
NcRNAs (FDR < 0.05, absolute logFC ≥0.3) | X chr | 7 | 0 | 14 | 22 | 18 | 34 |
Autosomal | 6 | 17 | 294 | 503 | 355 | 671 | |
