Table 1 PFAM and InterPro annotation for A. oryzae M2040 lineage specific genes. The A. oryzae M2040 lineage specific genes and predicted domains.
Scaffold | Gene ID | PFAM Domain | InterPro Classification |
|---|---|---|---|
NODE_14 | g1437 | Carbon-nitrogen hydrolase | Carbon-nitrogen hydrolase |
NODE_17 | g1677 | Domain of unknown function (DUF3328) | Mycotoxin biosynthesis protein UstYa-like |
NODE_17 | g1678 | Domain of unknown function (DUF3328) (x2) | Mycotoxin biosynthesis protein UstYa-like (x2) |
NODE_35 | g3027 | Ankyrin repeat (x2) | Ankyrin repeat (x2) |
Ankyrin repeats (many copies) | AAA + ATPase domain | ||
AAA domain | Ankyrin repeat-containing domain | ||
Ankyrin repeats (3 copies) | Â | ||
NODE_54 | g4145 | Phosphotransferase enzyme family | Aminoglycoside phosphotransferase |
NODE_54 | g4153 | Patatin-like phospholipase | Patatin-like phospholipase domain |
NODE_54 | g4155 | FAD-binding domain | FAD-binding 8 |
Ferric reductase NAD binding domain | Ferric reductase, NAD binding domain | ||
NODE_54 | g4156 | Protein kinase domain | Protein kinase domain |
NODE_54 | g4157 | Protein of unknown function (DUF3723) | Protein of unknown function DUF3723 |
NODE_54 | g4161 | Protein of unknown function (DUF3435) | Protein of unknown function DUF3435 |
NODE_73 | g5191 | WD domain, G-beta repeat (x8) | WD40 repeat (x8) |
NODE_193 | g9143 | SET domain | SET domain |
NODE_194 | g9174 | AAA domain (x2) | Â |
NODE_194 | g9176 | Argonaute linker 1 domain | Piwi domain |
Piwi domain | Argonaute, linker 1 domain | ||
PAZ domain | PAZ domain | ||
Helicase conserved C-terminal domain | Helicase, C-terminal | ||
N-terminal domain of argonaute | Protein argonaute, N-terminal | ||
Dicer dimerisation domain | Dicer dimerisation domain | ||
Ribonuclease III domain (x2) | Ribonuclease III domain (x2) | ||
NODE_289 | g10541 | Protein kinase domain | Protein kinase domain |
Ulp1 protease family, C-terminal catalytic domain | Ulp1 protease family, C-terminal catalytic domain | ||
NODE_290 | g10546 | Man1-Src1p-C-terminal domain | Man1-Src1p-C-terminal domain |
NODE_326 | g10914 | Ferric reductase like transmembrane component | Ferric reductase transmembrane component-like domain |
FAD-binding domain | FAD-binding 8 | ||
NODE_326 | g10915 | Phosphorylase superfamily | Nucleoside phosphorylase domain |
NODE_326 | g10916 | Protein kinase domain | Protein kinase domain |
NODE_341 | g11019 | Protein of unknown function (DUF3645) | Protein of unknown function DUF3645 |
Protein of unknown function (DUF3638) | Protein of unknown function DUF3638 | ||
NODE_369 | g11222 | Heterokaryon incompatibility protein (HET) | Heterokaryon incompatibility |
NODE_371 | g11231 | Shwachman-Bodian-Diamond syndrome (SBDS) protein | Ribosome maturation protein SBDS, N-terminal |
ATP synthase alpha/beta chain, C terminal domain | ATP synthase, alpha subunit, C-terminal | ||
ATP synthase alpha/beta family, beta-barrel domain | ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain | ||
ATP synthase alpha/beta family, nucleotide-binding domain | ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain | ||
NODE_371 | g11232 | V-type ATPase 116 kDa subunit family | V-type ATPase, V0 complex, 116 kDa subunit family |
NODE_378 | g11269 | Man1-Src1p-C-terminal domain | Man1-Src1p-C-terminal domain |
NODE_378 | g11273 | Methyltransferase domain | Methyltransferase type 11 |
NODE_384 | g11303 | Heterokaryon incompatibility protein (HET) | Heterokaryon incompatibility |
NODE_404 | g11391 | ATPase family associated with various cellular activities (AAA) | ATPase, AAA-type, core |
NODE_416 | g11434 | Glycosyl hydrolase family 10 (x2) | Glycoside hydrolase family 10 domain (x2) |
NODE_417 | g11436 | Glycosyl hydrolases family 32 N-terminal domain | Glycosyl hydrolase family 32, N-terminal |
NODE_417 | g11437 | Sugar (and other) transporter | Major facilitator, sugar transporter-like |
NODE_437 | g11494 | Alcohol dehydrogenase GroES-like domain | Alcohol dehydrogenase, N-terminal |
Zinc-binding dehydrogenase | Alcohol dehydrogenase, C-terminal | ||
NODE_437 | g11495 | Eukaryotic elongation factor 5 A hypusine, DNA-binding OB fold | Translation elongation factor, IF5A C-terminal |
Elongation factor P (EF-P) KOW-like domain | Translation elongation factor, KOW-like | ||
NODE_450 | g11526 | Cation transporter/ATPase, N-terminus | Cation-transporting P-type ATPase, N-terminal |
NODE_450 | g11527 | MAC/Perforin domain | Membrane attack complex component/perforin (MACPF) domain |
NODE_454 | g11536 | Ankyrin repeats (3 copies) (x3) | Ankyrin repeat-containing domain (x3) |
Ankyrin repeats (many copies) | Â | ||
Fungal specific transcription factor domain | Transcription factor domain, fungi | ||
AAA domain | AAA + ATPase domain | ||
NODE_468 | g11564 | Protein of unknown function (DUF3435) | Protein of unknown function DUF3435 |
NODE_468 | g11565 | Protein kinase domain | Protein kinase domain |
NODE_472 | g11572 | Protein of unknown function (DUF3435) | Protein of unknown function DUF3435 |
NODE_476 | g11576 | NmrA-like family | NmrA-like domain |
NODE_479 | g11582 | Glycosyltransferase family 25 (LPS biosynthesis protein) | Glycosyl transferase, family 25 |
NODE_479 | g11583 | Glycosyltransferase sugar-binding region containing DXD motif | Glycosyltransferase, DXD sugar-binding motif |
NODE_486 | g11594 | Ankyrin repeats (3 copies) (x2) | Ankyrin repeat-containing domain (x2) |
NODE_486 | g11595 | Glycosyl transferase family 8 | Glycosyl transferase, family 8 |
NODE_494 | g11605 | Phosphotransferase enzyme family | Aminoglycoside phosphotransferase |
NODE_498 | g11612 | NACHT domain | Â |
NODE_501 | g11617 | Clostridium epsilon toxin ETX/Bacillus mosquitocidal toxin MTX2 | Clostridium epsilon toxin ETX/Bacillus mosquitocidal toxin MTX2 |
NODE_513 | g11632 | Haloacid dehalogenase-like hydrolase | Â |
Cation transporting ATPase, C-terminus | Cation-transporting P-type ATPase, C-terminal | ||
NODE_541 | g11662 | T5orf172 domain | Bacteriophage T5, Orf172 DNA-binding |
NODE_573 | g11683 | LysM domain (x3) | LysM domain (x3) |
NODE_578 | g11688 | Sodium/hydrogen exchanger family | Cation/H+ exchanger |
NODE_612 | g11709 | Sugar (and other) transporter | Major facilitator, sugar transporter-like |
NODE_654 | g11732 | Phosphorylase superfamily | Nucleoside phosphorylase domain |
NODE_691 | g11743 | Peptidase family M49 | Â |
NODE_713 | g11751 | BTB/POZ domain | BTB/POZ domain |
NODE_860 | g11779 | E1-E2 ATPase | Â |
