Figure 5
From: Rotational direction of flagellar motor from the conformation of FliG middle domain in marine Vibrio
(A) The root mean square fluctuation (RMSF) of the residues in the FliGMC domains of the wild-type (WT) and mutant proteins. The secondary structure of the FliGMC1 domain colored by the domain architecture is shown on the top of the plot. (B) The number of hydrogen bonds formed between LN and LC (upper) and between αΜ5-LC (lower) in each conformation of the WT and mutant proteins. The horizontal axis indicates the number of H-bonds, and vertical axis indicates the number of conformations. For each protein, 3000 conformations were used for the calculation. Colors in this figure indicate WT (black), G196S (G214S) (green), G197A (G215A) (red) and E126D (E144D) (blue), respectively.
