Table 1 The genome characteristics of purple bacteria used in this study.
Organisms | Chromosome | Plasmid | Size (Mb) | Chr 1 (Mb) | Chr 2 (Mb) | G + C % | Protein | gene | Accession |
|---|---|---|---|---|---|---|---|---|---|
YL28 | 1 | — | 3.84 | 3.84 | — | 68.9 | 3,188 | 3,360 | LSYU00000000.1 |
Thiocystis violascens DSM 198 | 1 | — | 5.02 | 5.02 | — | 62.6 | 4,261 | 4,465 | CP003154.1 |
Allochromatium vinosum DSM 180 | 1 | 2 | 3.67 | 3.53 | — | 64.4 | 3,148 | 3,262 | CP001896.1 |
Marichromatium purpuratum 984 | 1 | — | 3.78 | 3.78 | — | 67.9 | 3,159 | 3,272 | EU850807.1 |
Ectothiorhodospira sp. BSL-9 | 1 | — | 3.55 | 3.55 | — | 63 | 3118 | 3,249 | CP011994.1 |
Thioflavicoccus mobilis 8321 | 1 | 1 | 4.13 | 4.05 | — | 65.5 | 3462 | 3,602 | NR102479.1 |
Halorhodospira halophila SL1 extremly halophilic | 1 | — | 2.68 | 2.68 | — | 68 | 2375 | 2,458 | CP000544.1 |
Rhodopseudomonas palustris CGA009 | 1 | 1 | 5.47 | 5.46 | — | 65 | 4,820 | 4,898 | BX572608.1 |
Rhodopseudomonas palustris HaA2 | 1 | — | 5.33 | 5.33 | — | 66 | 4,683 | 4,772 | CP000250.1 |
Rhodopseudomonas palustris BisB18 | 1 | — | 5.51 | 5.51 | — | 65 | 4,886 | 5,016 | CP000301.1 |
Rhodopseudomonas palustris BisB5 | 1 | — | 4.89 | 4.89 | — | 64.8 | 4,397 | 4,492 | CP000283.1 |
Rhodopseudomonas palustris BisA53 | 1 | — | 5.51 | 5.51 | — | 64.4 | 4,878 | 4,972 | CP000463.1 |
Rhodopseudomonas palustris TIE-1 | 1 | — | 5.74 | 5.74 | — | 64.9 | 5,246 | 5,382 | CP001096.1 |
Rhodopseudomonas palustris DX-1 | 1 | — | 5.4 | 5.4 | — | 65.4 | 4,917 | 5,082 | EU221583.1 |
Rhodoplanes sp. Z2-YC6860 | 1 | — | 8.19 | 8.19 | — | 63.5 | 7443 | 7,606 | GQ369128.3 |
Blastochloris viridis | 1 | — | 3.73 | 3.72 | — | 67.9 | 3107 | 3,230 | D14430.2 |
Blastochloris viridis ATCC19567 | 1 | — | 3.73 | 3.72 | — | 67.9 | 3104 | 3,238 | D2 5314.1 |
Blastochloris viridis DSM_133 | 1 | — | 3.72 | 3.72 | — | 67.9 | 3114 | 3,236 | HQ009851.1 |
Rhodospirillum rubrum ATCC 11170 | 1 | 1 | 4.41 | 4.35 | — | 65.3 | 3,838 | 3,917 | CP000230.1 |
Rhodospirillum rubrum F11 | 1 | — | 4.35 | 4.35 | — | 65.4 | 3,878 | 3,946 | CP003046.1 |
Rhodospirillum centenum SW (Rhodocista centenaria) | 1 | — | 4.36 | 4.36 | — | 70.5 | 4,003 | 4,102 | CP000613.2 |
Pararhodospirillum photometricum DSM 122 | 1 | — | 3.88 | 3.88 | — | 64.7 | 3,117 | 3,434 | HE663493.1 |
Rhodomicrobium vannielii ATCC 17100 | 1 | — | 4.01 | 4.01 | — | 62.2 | 3,565 | 3,793 | CP002292.1 |
Rhodobacter sphaeroides 2.4.1 | 2 | 5 | 4.6 | 3.19 | 0.94 | 68.8 | 4,242 | 4,370 | CP000144.2 |
Rhodobacter sphaeroides MBTLJ-8 | 2 | 4 | 4.66 | 3.19 | 0.94 | 68.7 | 4204 | 4,362 | CP012960.1 |
Rhodobacter sphaeroides MBTLJ-13 | 2 | 5 | 4.65 | 3.19 | 0.94 | 68.8 | 4200 | 4,358 | CP015210.1 |
Rhodobactersphaeroides ATCC 17029 | 2 | 1 | 4.49 | 3.15 | 1.22 | 69 | 4,131 | 4,254 | CP000577.1 |
Rhodobacter sphaeroides ATCC 17025 | 1 | 5 | 4.56 | 3.22 | — | 68.2 | 4,333 | 4,466 | CP000661.1 |
Rhodobacter sphaeroides KD131 | 2 | 2 | 4.71 | 3.15 | 1.3 | 69.1 | 4,569 | 4,638 | CP001151.1 |
Rhodoferax ferrireducens T118 | 1 | 1 | 4.97 | 4.71 | — | 59.6 | 4,436 | 4,554 | CP000267.1 |
Rhodobacter capsulatus SB 1003 | 1 | 1 | 3.87 | 3.74 | — | 66.6 | 3,642 | 3,740 | CP001312.1 |
Rhodobacter sp. LPB0142 | 1 | 3 | 3.78 | 3.46 | — | 66 | 3530 | 3,660 | KX066852.2 |
Rhodovulum sulfidophilum DSM1374 | 1 | 2 | 4.34 | 4.13 | — | 66.9 | 3876 | 4,002 | CP015418.1 |
Rhodovulum sulfidophilum DSM2351 | 1 | 3 | 4.73 | 4.45 | — | 66.9 | 4155 | 4,340 | D16430.1 |
Rhodovulum sulfidophilum SNK001 | 1 | 1 | 4.19 | 4.08 | — | 66.8 | 3746 | 3,873 | CP015421.1 |
Rubrivivax gelatinosus IL144 | 1 | — | 5.04 | 5.02 | — | 71.2 | 4505 | 4,591 | AB016167.1 |
