Table 1 Differential expression genes in cellulose synthesis process under cadmium stress in cotton root.

From: Analysis of potential strategies for cadmium stress tolerance revealed by transcriptome analysis of upland cotton

Gene and Blast

log2Ratio(H0-VS-H1)

log2Ratio(H0-VS-H2)

log2Ratio(H0-VS-H3)

The cellulose synthesis genes of primary cell wall

CotAD_38396 CESA7

1.557482

1.713838

1.983378

CotAD_23453 CESA8

1.591243

2.027124

1.774615

CotAD_69280 CESA8

1.058526

1.281549

1.351638

CotAD_57824 Cellulose synthase A4

2.456065

2.864345

2.462791

CotAD_54812 Cellulose synthase A4

3.571157

3.405992

3.560715

CotAD_00575 Cellulose synthase A1

1.837912

2.082523

2.219553

CotAD_10480 Cellulose-synthase-like C5

1.98907

1.144908

1.882366

CotAD_56775 Cellulose-synthase-like C5

2.391528

1.295149

1.885731

CotAD_05132 Cellulose synthase-like B3

−3.263034

−1.607683

−2.29956

CotAD_46937 Cellulose synthase-like E1

−0.293683

−1.034949

−0.138555

CotAD_53925 Cellulose synthase like G3

−0.722466

−1.552541

−2.956931

CotAD_19832 Cellulose synthase like G3

−11.049849

−0.88243

−0.568049

The cellulose synthesis genes of Secondary cell wall

CotAD_62834 CESA9

1.69329

1.822638

2.359511

CotAD_51434 CESA9

1.938548

2.234141

2.487153

CotAD_72572 CESA10

1.501478

2.286739

2.522806

CotAD_58043 Cellulose-synthase-like C12

1.460226

1.528496

2.233591

CotAD_13312 Cellulose-synthase-like C4

1.2935

2.003514

2.295651

Other related cellulose synthesis genes

CotAD_48408 Cellulose synthase

1.419384

1.639206

2.051312

CotAD_51651 Cellulose synthase

1.864864

2.215985

2.176928

CotAD_61788 Cellulose synthase 2-Dt

1.661831

2.121881

2.292562

CotAD_63213 Cellulose synthase family protein

1.113962

1.30248

1.651

CotAD_10636 Cellulose synthase like G2

1.379658

2.02403

1.714423

CotAD_10635 Cellulose synthase like G2

1.23078

2.061952

1.665133

CotAD_59099 Beta tubulin

3.04459

3.585502

5.046353

CotAD_21797 ATP binding microtubule motor family protein

1.429138

1.463174

1.78061

Pectin hydrolysis related genes

CotAD_11961 Pectin methylesterase inhibitor superfamily

4.137504

2.918386

3.996389

CotAD_01805 Pectin methylesterase inhibitor superfamily

2.632695

3.375199

3.27894

CotAD_22628 Pectin methylesterase inhibitor superfamily

2.650687

3.059871

3.184791

CotAD_45983 Pectin methylesterase inhibitor superfamily

3.063326

4.725126

3.411565

CotAD_59548 Pectin methylesterase inhibitor superfamily

2.881072

3.27894

3.441269

CotAD_71768 Pectin methylesterase inhibitor superfamily

2.849094

3.333737

3.500173

CotAD_50138 Pectin methylesterase inhibitor superfamily

1.357719

2.728178

1.879046

CotAD_70731 Pectin methylesterase inhibitor superfamily

1.765261

3.091386

1.794206

CotAD_32591 Pectin methylesterase inhibitor superfamily

2.189825

2.369234

2.254241

CotAD_76273 Pectin methylesterase inhibitor superfamily

1.72259

2.10728

1.578135

CotAD_45985 Pectin methylesterase inhibitor superfamily

−1.515442

−2.166455

−1.438093

CotAD_28069 Pectin methylesterase inhibitor superfamily

−0.630113

−0.462516

−1.613652

CotAD_63272 Pectin methylesterase inhibitor superfamily

−0.734779

−0.81509

−1.655598

CotAD_06244 Polygalacturonase-inhibiting protein

1.22272

2.802103

1.630121

CotAD_07327 Polygalacturonase-inhibiting protein

1.540627

2.810026

1.674442

CotAD_17205 Polygalacturonase-inhibiting protein

−1.179787

−0.96138

−1.171961