Table 2 Differential expression transcription factors under cadmium stress in cotton root.

Up-regulated transcripts

CotAD_02717

5.229531

4.714754

5.49896

Myb domain protein 18[Theobroma cacao]

Positive regulator of the phyA photoresponse

CotAD_23906

3.424715

3.49136

4.690159

Myb domain protein 55 [Theobroma cacao]

involved in Brassinosteroid homeostasis and growth responses

CotAD_19868

2.710493

2.890771

3.460425

Myb domain protein 40 [Theobroma cacao]

function unknown

CotAD_76285

2.297773

2.479582

2.641895

Myb domain protein 40 [Theobroma cacao]

function unknown

CotAD_50930

1.830316

1.64293

1.60539

Myb-like HTH transcriptional regulator protein [Theobroma cacao]

function unknown

CotAD_62038

1.674672

2.007526

2.324341

MYb transcription factor [Gossypium hirsutum]

involved in the response to UV-B

CotAD_39114

1.063645

1.621674

2.095315

Myb domain protein 55 [Theobroma cacao]

involved in Brassinosteroid homeostasis and growth responses

CotAD_48495

2.645083

2.98263

3.303392

GATA transcription factor 9 [Theobroma cacao]

function unknown

CotAD_23031

2.341828

2.160992

2.989946

GATA transcription factor 9 [Theobroma cacao]

function unknown

CotAD_75922

1.556025

1.49199

2.442026

GATA transcription factor 9 [Theobroma cacao]

function unknown

CotAD_59298

1.369646

1.944693

2.293563

GATA transcription factor 2 [Theobroma cacao]

positive regulator of photomorphogenesis

CotAD_36519

1.357823

2.199698

1.54739

GATA zinc finger protein regulating nitrogen assimilation [Theobroma cacao]

function unknown

CotAD_55882

1

1.053503

1.195975

GATA zinc finger protein regulating nitrogen assimilation [Theobroma cacao]

function unknown

CotAD_38727

2.49114

3.372333

2.093109

Zinc finger protein [Theobroma cacao]

involved in secondary wall biosynthesis

CotAD_30228

1.973305

2.385891

2.909453

C2H2-type zinc finger family protein[Theobroma cacao]

function unknown

CotAD_53425

3.342392

3.1836

3.336963

Basic-leucine zipper transcription factor family protein [Theobroma cacao]

involved in lipid metabolism or cellular transpor

CotAD_16854

1.905141

2.242857

2.20543

Basic-leucine zipper transcription factor family protein [Theobroma cacao]

involved in lipid metabolism or cellular transpor

CotAD_21422

1.999432

1.737874

1.377638

Integrase-type DNA-binding superfamily protein[Theobroma cacao]

involved in ethylene signaling pathways

CotAD_11710

1.654185

1.162601

2.048023

ethylene-responsive element-binding protein 5 [Gossypium barbadense]

involved in ethylene signaling pathways

CotAD_61187

1.843845

2.563242

1.513578

LOB domain-containing protein 4

function unknown

Dn-regulated transcripts

CotAD_13693

−2.066401

−2.447005

−3.066401

Basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Theobroma cacao]

involved in iron homeostasis

CotAD_55579

−2.024977

−1.152438

−3.169925

Basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Theobroma cacao]

involved in iron homeostasis

CotAD_12483

−1.683411

−1.834735

−2.361483

Basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Theobroma cacao]

involved in Interactions between Ethylene and Auxin

CotAD_54397

−1.374919

−1.533229

−1.290792

Basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Theobroma cacao]

involved in Interactions between Ethylene and Auxin

CotAD_08994

−1.201244

−1.241635

−1.704707

Basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Theobroma cacao]

involved in salicylic-dependent defense signaling response

CotAD_50063

−1.613672

−2.009292

−1.449406

NAC domain protein 9 [Gossypium hirsutum]

function unknown

CotAD_73593

−1.210922

−1.524039

−1.079658

NAC domain protein 9 [Gossypium hirsutum]

function unknown

CotAD_70812

−1.214829

−2.034157

−1.538036

Myb-like transcription factor family protein [Theobroma cacao]

function unknown