Table 1 Statistical summary of reads acquired from transcriptome analysis.
Description | Samples | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
U-I 1 | U-I 2 | U-I 3 | B-I 1 | B-I 2 | B-I 3 | V-I 1 | V-I 2 | V-I 3 | P-I 1 | P-I 2 | P-I 3 | |
Reads | ||||||||||||
   Number of raw reads | 78,425,340 | 65,251,756 | 45,720,414 | 44,022,532 | 56,928,000 | 62,034,784 | 41,202,926 | 62,465,936 | 40,015,984 | 39,636,294 | 41,676,740 | 53,148,278 |
   Number of clean reads | 77,685,792 | 64,293,520 | 45,046,422 | 43,370,168 | 56,218,774 | 61,171,560 | 40,540,550 | 64,212,934 | 39,393,956 | 39,128,496 | 41,195,252 | 52,580,022 |
   Number of mapped reads | 35,293,624 | 34,011,030 | 21,768,778 | 23,241,737 | 25,467,484 | 26,640,040 | 25,215,623 | 37,509,022 | 19,159,186 | 6,587,353 | 13,259,405 | 11,685,297 |
   Number of uniquely mapped reads | 34,624,745 | 33,266,973 | 21,287,829 | 22,815,501 | 24,897,617 | 26,076,243 | 24,651,733 | 36,604,718 | 18,740,455 | 6,293,804 | 12,980,394 | 11,405,891 |
   Mapping rate of unique reads | 44.6% | 51.7% | 47.3% | 52.6% | 44.3% | 42.6% | 60.8% | 59.8% | 47.6% | 16.1% | 31.5% | 21.7% |
