Figure 8
From: Analysis of genetic diversity of Xanthomonas oryzae pv. oryzae populations in Taiwan
Transcriptome profiles of differentially expressed genes in TNG67 after inoculation of Xoo isolates. (a) A heatmap of differentially expressed rice genes after inoculation of Xoo XE3, XF89b, and XM9. The rice samples were collected at 7 days-post-inoculation (dpi). A total of 4924 up-regulated (≥2-fold change in at least one sample) genes, and 3856 down-regulated genes (≥2-fold change) (Supplementary Table S9) were included in the map. (b) The Venn diagram of up-regulated genes in all three samples. A total of 3790, 3094, and 2577 up-regulated genes (≥2-fold changes) in XE3, XM9, and XF89b were used for the diagram. (c) The GO enrichment of up-regulated genes that altered (≥2-fold change) in all three samples as core responsive genes. (d) The GO enrichment of up-regulated genes (≥2-fold changes) that were only altered in one or two samples as non-core responsive genes.
