Table 2 The top 20 of KEGG pathways with high representation for the specific up-regulated DEGs of FAG under low temperature stress.
Pathways | All modules | Firebrick4 | Mediumorchid | Turquoise | Green |
|---|---|---|---|---|---|
(% of 383) | (% of 166) | (% of 106) | (% of 82) | (% of 19) | |
Ribosome biogenesis in eukaryotes | 102 (26.63%) | 36 (21.69%) | 51 (48.11%) | 10 (12.20%) | 5 (26.32%) |
Spliceosome | 61 (15.93%) | 26 (15.66%) | 11 (10.38%) | 19 (23.17%) | 1 (5.26%) |
RNA transport | 33 (8.62%) | 11 (6.63%) | 12 (11.32%) | 8 (9.76%) | 2 (10.53%) |
Pyrimidine metabolism | 28 (7.31%) | 11 (6.63%) | 14 (13.21%) | 2 (2.44%) | 0 (0.00%) |
Purine metabolism | 27 (7.05%) | 9 (5.42%) | 14 (13.21%) | 4 (4.88%) | 0 (0.00%) |
mRNA surveillance pathway | 26 (6.79) | 13 (7.83%) | 7 (6.60%) | 6 (7.32%) | 0 (0.00%) |
RNA degradation | 22 (5.74%) | 8 (4.82%) | 9 (8.49%) | 2 (2.44%) | 2 (10.53%) |
RNA polymerase | 21 (5.48%) | 7 (4.22) | 12 (11.32%) | 2 (2.44%) | 0 (0.00%) |
Plant hormone signal transduction | 19 (4.96%) | 10 (6.02%) | 4 (3.77%) | 4 (4.88%) | 1 (5.26%) |
Homologous recombination | 13 (3.39%) | 9 (5.42) | 1 (0.94%) | 1 (1.22%) | 2 (10.53%) |
Protein processing in endoplasmic reticulum | 12 (3.13%) | 4 (2.41%) | 0 (0.00%) | 6 (7.32%) | 1 (5.26%) |
Mismatch repair | 9 (2.35%) | 5 (3.01%) | 1 (0.94%) | 1 (1.22%) | 2 (10.53%) |
Nucleotide excision repair | 9 (2.35%) | 4 (2.41% | 1 (0.94%) | 1 (1.22%) | 3 (15.79%) |
Ribosome | 9 (2.35%) | 5 (3.01%) | 1 (0.94%) | 3 (3.66%) | 0 (0.00%) |
DNA replication | 8 (2.09%) | 4 (2.41% | 1 (0.94%) | 1 (1.22%) | 2 (10.53%) |
Plant-pathogen interaction | 8 (2.09%) | 4 (2.41% | 0 (0.00%) | 2 (2.44%) | 2 (10.53%) |
Ascorbate and aldarate metabolism | 7 (1.83%) | 5 (3.01%) | 2 (1.89%) | 0 (0.00%) | 0 (0.00%) |
Glutathione metabolism | 7 (1.83%) | 6 (3.61%) | 0 (0.00%) | 1 (1.22%) | 0 (0.00%) |
Phosphatidylinositol signaling system | 7 (1.83%) | 2 (1.20%) | 0 (0.00%) | 3 (3.66%) | 2 (10.53%) |
ABC transporters | 6 (1.57%) | 0 (0.00%) | 4 (3.77%) | 2 (2.44%) | 0 (0.00%) |
