Table 1 Distribution of HIV-1 pol Sequences According to Subtype and Cohort.

From: Phylogeography of HIV-1 suggests that Ugandan fishing communities are a sink for, not a source of, virus from general populations

HIV Subtype

Database sequences (FCs)

FCs

GP

Total

P-values‡ (Proportions in FCs vs GP)

Subtype A1

15 (34.1%)

100 (47.4%)

177 (50.4%)

292

0.24

Subtype D

14 (31.8%)

70 (33.2%)

122 (34.8%)

206

0.35

Subtype C

1 (2.3%)

2 (0.9%)

9 (2.6%)

12

0.08

Inter-subtype recombinants

14 (31.8%)

39 (18.5%)

43 (12.2%)

96

0.02*

Total

44

211

351

606

 
  1. ‡P-values according to the two-sample test of proportions.
  2. *Significant difference in inter-subtype recombinants proportion; although the lower limit of the confidence interval (CI) is very close to zero, 95% CI (0.0004–0.126).
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