Table 2 Target gene prediction of differentially expressed lncRNAs detected in the IRvsIS group.

From: Novel Insights reveal Anti-microbial Gene Regulation of Piglet Intestine Immune in response to Clostridium perfringens Infection

Transcription ID

Target gene in cis

Target gene in trans

LNC_000231

ZC3H7A

ABCA1, ALPK1, ANAPC13, BCL2L10, BTG4, CD48, CLDN25, CRYBB3, DAZL, FOXR1, HMGB2, HSD17B10, IL18RAP, KDM6A, KPNA7, LAMB3, LENG8, MAGEB3, MRC2, S100A16, S100A6, SLA-DRB1, SLC39A4, SMARCA1, TCF4, TMEM187, TMEM244, FYB, TNFRSF11A, TRIM77, UXT, WDR88, ZNF684, ZP4, CD84, ENTPD1, IRAK3, MYCBP2, RASAL2, TLR8, RPL39, CYP1A1, PIP5KL1, TFCP2L1

LNC_001186

CYP1A1, PIP5KL1, TFCP2L1

 

LNC_001066

 

LCP2, CD84, ENTPD1, IRAK3, MYCBP2, RASAL2, TLR8

ENSSSCT00000018610

TNIP1, MARCH6

 

ENSSSCT00000032859

TMP-CH242-74M17.2, SLA-1, TRIM26, CH242-196B23.2

 

ALDBSSCT0000009442

SPOCD1

 

ALDBSSCT0000007865

EFR3A, OC90

 
  1. Note: The black represents the immune associated target genes of lncRNA, the underlined letter represents C. perfringens infectious diseases associated genes.
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