Table 2 Summary statistics of the cytochrome-b mtDNA haplotype sequences for the Peruvian diving petrel breeding colonies.

From: Unexpected population fragmentation in an endangered seabird: the case of the Peruvian diving-petrel

 

AZR

CHR

IGA

ILV

ISG

ALL

Haplotype diversity

HAZR = 0.711

HCHR = 0.632

HIGA = 0.810

HILV = 0.667

HISG = 0.778

HALL = 0.765

Nucleotide diversity

πAZR = 0.00125

πCHR = 0.00220

πIGA = 0.00204

πILV = 0.00185

πISG = 0.00203

πALL = 0.00213

Nucleotide diversity (nuclear SNP)

πAZR = 0.00226

πCHR = 0.00224

Pairwise differences

KAZR = 0.997

KCHR = 1.75

KIGA = 1.62

KILV = 1.47

KISG = 1.61

KALL = 1.70

Tajima’s D

DAZR = −0.649

DCHR = −0.430

DIGA = −1.02

DILV = 0.384

DISG = −0.673

DALL = −0.672

Tajima’s D (nuclear SNP)

DAZR = −0.361

DCHR = −0.364

  1. AZR: Isla Pan de Azúcar, CHR: Isla Choros, IGA: Isla Grande de Atacama, ILV: Isla La Vieja, ISG: Isla San Gallán, ALL: pooled samples. ns: p-value > 0.05. Values are computed from the cytochrome B sequence, or from nuclear SNP data when specified.