Table 1 Number of AS-SNPs identified per cell line.
Cell line | Total hz SNPs | Total AS-SNPs | Common AS-SNPs (%) | Rare AS-SNPs (%) | Population |
|---|---|---|---|---|---|
GM12878 | 2221835 | 5318 | 5150 (96,8%) | 168 (3,2%) | Caucasian |
GM18505 | 2976970 | 2132 | 1936 (90,8%) | 196 (9,2%) | Yoruban |
GM18526 | 2091055 | 1961 | 1883 (96,0%) | 78 (4%) | Han Chinese |
GM18951 | 2092387 | 1224 | 1195 (97,6%) | 29 (2,4%) | Japanese |
GM19099 | 2978401 | 1904 | 1735 (91,1%) | 169 (8,9%) | Yoruban |
GM19238 | 2964106 | 5580 | 5112 (91,6%) | 468 (8,4%) | Yoruban |
GM10847 | 2560997 | 1457 | 1401 (96,1%) | 56 (3,9%) | Caucasian |
7LCLs | 13025 | 11892 (91,3%) | 1133 (8,7%) | ||
Tot. unique | 17293 | 16094 (93%) | 1199 (7%) |
