Table 2 Average interaction energies of hydrophobic interactions during SMD simulation.

From: Steered molecular dynamic simulations of conformational lock of Cu, Zn-superoxide dismutase

Residues pair

Electrostatic energy(kJ/mol)

vdW energy(kJ/mol)

Total energy (kJ/mol)

Val5A-Gly49B

1.51

−1.94

−0.43

Val5A-Asp50B

−0.25

−2.86

−3.11

Val7A-Asn51B

0.13

−2.96

−2.83

Val7A-Thr52B

−0.02

−2.08

−2.10

Thr17A-Thr52B

0.05

−1.43

−1.37

Phe48A-Ala150B

−1.33

−3.34

−4.67

Phe48A-Lys151B

1.52

−5.42

−3.90

Gly49A-Val5B

1.01

−1.87

−0.86

Gly49A-Gly148B

−0.62

−2.36

−2.97

Asp50A-Val5B

−0.22

−2.65

−2.87

Asn51A-Val7B

0.62

−3.02

−2.40

Thr52A-Val7B

0.03

−2.04

−2.02

Ile111A-Gly112B

−0.07

−1.81

−1.88

Ile111A-Ile149B

−0.42

−1.94

−2.36

Gly112A-Ile111B

−0.05

−1.84

−1.89

Gly112A-Gly148B

−3.45

−1.57

−5.02

Arg113A-Ile149B

−1.01

−5.85

−6.86

Val146A-Gly148B

0.03

−1.31

−1.29

Gly148A-Gly49B

−0.67

−2.49

−3.16

Gly148A-Gly112B

−3.32

−1.81

−5.13

Ile149A-Phe48B

−3.85

−6.17

−10.02

Ile149A-Ile111B

−0.34

−2.32

−2.66

Ile149A-Arg113B

−0.51

−5.39

−5.89

Ala150A-Phe48B

−1.80

−3.83

−5.62

Lys151A-Phe48B

−0.52

−5.83

−6.34

Total

−13.55

−74.10

−87.65