Figure 2 | Scientific Reports

Figure 2

From: Illumina sequencing of clinical samples for virus detection in a public health laboratory

Figure 2

HTS assay performance with virus genomes and sample types. (A) Normalized reads (matching reads per million total reads per genome size, RPKM) are given for each sample type (tissue, ; serum, ; urine, ; feces, ; nappy swab, ; respiratory swab, ; and skin swab, ). Data was used to calculate a correlation (inset). (B) Sample types data represented as boxplots. Samples that were significantly different to the other types are indicated (*P < 0.01; Mann-Whitney). Normalized reads comparing (C) genome nucleic acid and (D) partite structure. (E) Coverage obtained shown as a percentage of total genome size. Individual data points are shown (°); the boxplots give the 1st and 3rd quartile, and whiskers 5th and 95th percentile.

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