Table 1 Putative viral proteins of Canada goose coronavirus.
Protein | Top Match in NCBI | Top match - aa % identity* | Size (aa) | Distance between TRS and start codon (nt) |
|---|---|---|---|---|
1a | 1a-Infectious bronchitis virus strain B1648 | 43 | 3825 | 480 |
1ab | 1ab-Infectious bronchitis virus strain ck/CH/LJL/05I | 57 | 6510 | 480 |
Spike | Spike-Infectious bronchitis virus strain N2-75 | 53 | 1184 | 82 |
3 | n/a | n/a | 53 | 0 |
4a | n/a | n/a | 55 | 3 |
Envelope | Envelope-Infectious bronchitis virus strain IS-1494 | 69 | 100 | n/a |
Membrane | Membrane-Duck Coronavirus isolate DK/GD/2014 | 72 | 235 | 74 |
5b | 4b-Infectious bronchitis virus strain Georgia 1998 Vaccine | 41 | 88 | n/a |
6 | n/a | n/a | 63 | 5 |
7a | 4b-Duck Coronavirus isolate DK/GD/2014 | 23 | 92 | 3 |
7b | n/a | n/a | 69 | n/a |
8a | 5a-Duck Coronavirus isolate DK/GD/2014 | 37 | 65 | 4 |
8b | 5b-Duck Coronavirus isolate DK/GD/2014 | 46 | 85 | n/a |
Nucleocapsid | Nucleocapsid-Goose Coronavirus | 94 | 414 | 94 |
10 | ORFxg-Goose Coronavirus | 92 | 97 | 0 |
11 | ORFyg-Goose Coronavirus | 81 | 180 | 91 |
