Table 1 Panel of CRC cell lines used in 3D cultures.

From: Short-term 3D culture systems of various complexity for treatment optimization of colorectal carcinoma

Cell line

Origin

Duke’s type

MSI/CIN status

Mutations/deregulations

Doubling time in 2D (h)

Ref

DLD1

Metastatic

C

MSI

APCl1417fs,R2166, KRASG13D, PIK3CAE545K;D549N, TP53S241F

20

68,69,70,– 71

SW620

Metastatic

C

MSS; CINpos46

APCQ1338, KRASG12V, TP53R273H;P309S

31

70,71,72,– 73

HCT116

Primary

A

MSI

KRASG13D, PIK3CAH1047R,

20–24

70, 71, 73, 74

LS174T

Primary

C

MSI

KRASG12D, PIK3CAH1047R,

32

70, 71, 75

HT29

Primary

C

MSS

APCE853;T1556fs, BRAFV600E, PIK3CAP449T, TP53R273H,

20–24

70, 76

Caco2

Primary

B

MSS; CINpos48

TP53

20–24

70, 77

SW48

Primary

C

MSI

EGFRG719S

31

70, 72, 78

  1. MSI: micro-satellite instability; MSS: micro-satellite stability; CIN: chromosomal instability pathway.