Table 2 Chromosome-wise distribution of single nucleotide polymorphisms (SNPs) between the two pools.
Chromosome | Length | Total number of SNPs (depth > = 3) | Selected SNPs (depth > = 29) |
|---|---|---|---|
1 | 43,270,923 | 110,255 | 564 |
2 | 35,937,250 | 112,971 | 572 |
3 | 36,413,819 | 71,795 | 306 |
4 | 35,502,694 | 76,962 | 430 |
5 | 29,958,434 | 77,046 | 442 |
6 | 31,248,787 | 85,383 | 452 |
7 | 29,697,621 | 59,361 | 301 |
8 | 28,443,022 | 92,078 | 737 |
9 | 23,012,720 | 70,213 | 362 |
10 | 23,207,287 | 69,774 | 396 |
11 | 29,021,106 | 74,449 | 442 |
12 | 27,531,856 | 74,955 | 462 |
Total | 373,245,519 | 975,242 | 5,466 |
