Figure 7
Map of samples on the EPI vs PE space built from the consensus of EPI and PE markers predicted through HOkM. Polar dendrograms of the HOkM of (A) the E3.5 data from Kurimoto et al.9 E3.5K(urimoto), and from Ohnishi et al.3 (B) E3.5O(hnishi) (C) E4.5O(hnishi). Violin plots of the silhouettes of the HOkM trajectories are presented in the centre of each dendrogram. The over-imposed green line in the violin plots marks the position of the medium silhouette distributions. Euler-Venn diagrams of the transcripts shared by the (D) PE and (E) EPI populations. (F) Map of single-cell transcriptomics data on the EPI - PE space. Violin plots of the distributions of the consensus (G) PE and (H) EPI markers. The mean and median are shown as red crosses and green squares, respectively.
