Table 2 SNPs differentiating 95NR1 and 95JB1.

From: SMRT sequencing reveals differential patterns of methylation in two O111:H- STEC isolates from a hemolytic uremic syndrome outbreak in Australia

Strain

Base Change

95JB1 site

95NR1 site

Amino Acid Change

Illumina1

PacBio

Annotation

95JB1

C-T

587038

587038

P-L

+

+

glxK (Glycerate kinase II

95JB1

G-T

3227026

3227373

V-F

+

+

End of Stx1 prophage

95JB1

G-A

3602596

3602945

E-K

+

+

metK (Methionine adenosyltransferase 1)

95JB1

G-C

3813994

3814343

Stop codon-Y

+

+

fadH (2, 4-dienoyl-CoA reductase)

p95JB1B

G-C

20482

20477

P-A

+

+

 
  1. 1SNPs identified by McAllister et al.4.
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