Figure 3 | Scientific Reports

Figure 3

From: Systematic comparison of germline variant calling pipelines cross multiple next-generation sequencers

Figure 3

Intersection of variant Calling results of all combinations in SNPs and INDELs of WES datasets. The top bar-plot indicates the intersection size. This plot provides the number of variants that are uniquely called by one tool (a single point) or the numbers of variants called by many tools (two or more points). The bottom left plot indicates the set size. The linked points below display the intersecting sets of interest or which tools called variants. (A) UpSetR plot indicates intersection of variant calling results of all combinations in SNPs. (B) UpSetR plot indicates intersection of variant calling results of all combinations in INDELs.

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