Table 1 A list of the chimeric reads detected in the analysis of ACH-2 cells (Top 10 reads are shown).
From: HIV-1 DNA-capture-seq is a useful tool for the comprehensive characterization of HIV-1 provirus
IS | Left reads of IS | Right reads of IS | Total reads | Strand | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
Chr | Start site | End site | # reads | Chr | Start site | End site | # reads | |||
#1 | chr1 | 121484766 | 121484813 | 1 | chr1 | 121485140 | 121485216 | 1 | 2 | − |
#2 | chr3 | 106552333 | 106552548 | 2 | chr3 | 106552684 | 106552760 | 1 | 3 | − |
#3 | chr7 | 33058453 | 33059404 | 723 | chr7 | 33059397 | 33060344 | 695 | 1418 | − |
#4 | chr15 | 52449478 | 52449554 | 1 | chr15 | 52449692 | 52449937 | 5 | 6 | − |
#5 | chr15 | 64629463 | 64630237 | 85 | chr15 | 64630232 | 64630902 | 77 | 162 | − |
#6 | chr1 | 17848557 | 17848633 | 1 | . | . | . | . | 1 | − |
#7 | chr1 | 19236464 | 19236540 | 1 | . | . | . | . | 1 | − |
#8 | chr1 | 46736503 | 46736579 | 1 | . | . | . | . | 1 | − |
#9 | chr1 | 55243102 | 55243178 | 1 | . | . | . | . | 1 | + |
#10 | chr1 | 55561350 | 55561426 | 2 | . | . | . | . | 2 | − |
