Table 2 Genes coding for proteins potentially involved in pathogen-plant interaction in the genome of L. theobromae LA-SOL3 and comparison with L. theobromae CSS-01s (Yan et al.)14.
LA-SOL3 | CSS-01s | Method | |
|---|---|---|---|
Total proteins | 12785 | 12902 | BRAKER1 |
Secreted proteins | 677 | 937 | FunSec |
Enzymes | 4579 | — | E2P2 |
Secreted Enzymes | 335 | — | FunSec + E2P2 |
CAZymes | 789 | 763 | dbCAN |
Secreted CAZymes | 272 | — | FunSec + dbCAN |
Metabolic gene clusters | 52 | 58 | fungiSMASH |
Cytochrome P450s | 44 | — | The Cytochrome P450 Homepage |
Peroxidases | 40 | — | fPoxDB |
Transporters | 1957 | 2419 | Transporter Classification Database |
Pathogen-Host Interactions | 4075 | — | PHI-base |
