Table 4 The relapse-associated SNPs for patients with HSCT.

From: Association between single nucleotide polymorphisms within HLA region and disease relapse for patients with hematopoietic stem cell transplantation

SNP

Genome position1 (bp)

Gene/location

Source2

Disease/Status

Number of patients (%)

P*

Donor genotype

rs111394117

32219436

NOTCH4, intron

rs394657

AML

A/A

A/G

G/G

0.0166

Ā Ā Ā Ā 

Relapse

1 (6.7)

2 (13.3)

12 (80.0)

Ā 
Ā Ā Ā Ā 

Non-relapse

0 (0.0)

0 (0.0)

40 (100.0)

Ā 

rs213210

33208047

RING1, promoter

rs107822

ALL

A/A

A/G

G/G

0.0285

Ā Ā Ā Ā 

Relapse

3 (25.0)

8 (66.7)

1 (8.3)

Ā 
Ā Ā Ā Ā 

Non-relapse

10 (25.0)

12 (30.0)

18 (45.0)

Ā 

Recipient genotype

rs79327197

33010635

HLA-DOA,

rs429916

ALL

A/A

A/G

G/G

0.0150

Ā Ā 

promoter

Ā 

Relapse

10 (66.7)

5 (33.3)

0 (0.0)

Ā 
Ā Ā Ā Ā 

Non-relapse

35 (94.6)

2 (5.4)

0 (0.0)

Ā 

rs2009658

31538244

1.6 kb telomeric of

rs915654

ALL

C/C

C/G

G/G

0.0148

Ā Ā 

LTA

Ā 

Relapse

12 (80.0)

1 (6.7)

2 (13.3)

Ā 
Ā Ā Ā Ā 

Non-relapse

25 (67.6)

12 (32.4)

0 (0.0)

Ā 

rs213210

33208047

RING1, promoter

rs107822

AML

A/A

A/G

G/G

0.0444

Ā Ā Ā Ā 

Relapse

2 (8.3)

13 (54.2)

9 (37.5)

Ā 
Ā Ā Ā Ā 

Non-relapse

20 (34.5)

26 (44.8)

12 (20.7)

Ā 

rs17220087

32813299

HLA-DOB, intron

rs2071479

AML

A/A

A/C

C/C

0.0465

Ā Ā Ā Ā 

Relapse

0 (0.0)

0 (0.0)

25 (100.0)

Ā 
Ā Ā Ā Ā 

Non-relapse

0 (0.0)

8 (14.3)

48 (85.7)

Ā 
Ā Ā Ā Ā 

ALL

A/A

A/C

C/C

0.0311

Ā Ā Ā Ā 

Relapse

0 (0.0)

3 (20.0)

12 (80.0)

Ā 
Ā Ā Ā Ā 

Non-relapse

0 (0.0)

1 (2.6)

37 (97.4)

Ā 

rs17213693

32813344

HLA-DOB, intron

rs2071479

AML

C/C

C/G

G/G

0.0465

Ā Ā Ā Ā 

Relapse

0 (0.0)

0 (0.0)

25 (100.0)

Ā 
Ā Ā Ā Ā 

Non-relapse

0 (0.0)

8 (14.3)

48 (85.7)

Ā 
Ā Ā Ā Ā 

ALL

C/C

C/G

G/G

Ā 
Ā Ā Ā Ā 

Relapse

0 (0.0)

3 (20.0)

12 (80.0)

0.0311

Ā Ā Ā Ā 

Non-relapse

0 (0.0)

1 (2.6)

37 (97.4)

Ā 

rs2070120

32813137

HLA-DOB, 3′UTR

rs2071479

ALL

A/A

A/G

G/G

0.0311

Ā Ā Ā Ā 

Relapse

0 (0.0)

3 (20.0)

12 (80.0)

Ā 
Ā Ā Ā Ā 

Non-relapse

0 (0.0)

1 (2.6)

37 (97.4)

Ā 
  1. *Statistical analyses were performed by using genotypic test or Chi-square test.