Table 2 Selected SNPs within steroid hormone-related genes.

From: Steroid hormone-related polymorphisms associate with the development of bone erosions in rheumatoid arthritis and help to predict disease progression: Results from the REPAIR consortium

Gene

Chr.

dbSNP rs#

Nucleotide substitution

Effect-allele

Amino acid substitution

CYP1A1

15

rs1799814

A/C

A

T461N

CYP1A2

15

rs762551

A/C

C

intronic

CYP1B1

2

rs1800440

A/G

G

N453T

CYP1B1

2

rs1056836

C/G

G

L432V

CYP1B1

2

rs10012

C/G

G

R48G

CYP2C9

10

rs1799853

C/T

T

R144C

CYP2C9

10

rs1057910

A/C

C

I359L

CYP2C19

10

rs12248560

C/T

T

Near gene

CYP2C19

10

rs4244285

A/G

A

P227P

CYP3A4

7

rs2740574

A/G

G

Near gene

CYP3A4

7

rs11773597

C/G

C

Near gene

CYP17A1

10

rs743572

A/G

G

5′-UTR

ESR1

6

rs851984

C/T

T

intronic

ESR1

6

rs2881766

G/T

G

intronic

ESR1

6

rs2071454

G/T

G

5′-UTR

ESR1

6

rs2077647

A/G

G

S10S

ESR1

6

rs827421

C/T

C

intronic

ESR1

6

rs2234693

C/T

C

Intronic

ESR1

6

rs9340799

A/G

G

intronic

ESR1

6

rs1801132

C/G

G

P325P

ESR1

6

rs3798577

C/T

C

3′-UTR

ESR1

6

rs910416

C/T

T

Near gene

ESR2

14

rs1255998

C/G

G

3′-UTR

ESR2

14

rs928554

A/G

G

3′-UTR

ESR2

14

rs4986938

T/C

T

3′-UTR

ESR2

14

rs1271572

G/T

T

Near gene

FcγR2A

1

rs1801274

A/G

G

H131R

FcγR3A

1

rs396991

A/C

C

V158F

GSTP1

11

rs1695

A/G

G

I105V

GSTP1

11

rs1138272

C/T

T

A114V

HSD17B1

17

rs605059

C/T

T

G313S

NR1I2

3

rs2276706

A/G

A

Near gene

NR1I2

3

rs1464603

C/T

C

intronic

NR1I2

3

rs6785049

A/G

G

intronic

NR1I2

3

rs2276707

C/T

T

intronic

NR1I2

3

rs1054191

A/G

A

3′-UTR

PGR

11

rs1042838

C/A

A

V660L

PGR

11

rs1379130

A/G

A

G393G

PGR

11

rs518162

A/G

A

5′-UTR

SHBG

17

rs6259

A/G

A

D356N

SULT1A1

16

rs9282861

A/G

A

R213H

  1. Abbreviations: SNP, single nucleotide polymorphism; MAF, minor allele frequency; UTR, untranslated region.