Table 2 Information regarding IR expansion-contraction for all analyzed Ranunculales species using the Amborella plastome as the standard.

From: Structural variation of the complete chloroplast genome and plastid phylogenomics of the genus Asteropyrum (Ranunculaceae)

Species

Gene number in IR

length of IR

Additional (or absent) genes when IR expansion-contraction occurs (Amborella as the standard)

Amborella trichopoda

17

26651

 

Aconitum barbatum

17

26090

 

Aconitum kuznezoffii

17

26282

 

Aconitum reclinatum

17

26061

 

Adonis coerulea

17

26087

 

Anemoclema glaucifolium

24

31256

infA, rps8, rpl14, rpl16, rps3, rpl22, rps19

Anemone tomentosa

24

31490

infA, rps8, rpl14, rpl16, rps3, rpl22, rps19

Anemone trullifolia

24

31022

infA, rps8, rpl14, rpl16, rps3, rpl22, rps19

Asteropyrum peltatum spp. cavaleriei

25

31429

rpl36, infA, rps8, rpl14, rpl16, rps3, rpl22, rps19

Asteropyrum peltatum spp. peltatum

27

32659

rpoA, rps11, rpl36, infA, rps8, rpl14, rpl16, rps3, rpl22, rps19

Batrachium bungei

17

25352

 

Beesia calthifolia

17

26500

 

Berberis amurensis

32

37152

psbB, psbT, psbN, psbH, petB, petD, rps11, rpl36, infA, rps8, rpl14, rpl16, rps3, rpl22, rps19

Callianthemum alatavicum

17

25978

 

Caltha palustris

17

26421

 

Ceratocephala falcata

16

24165

rpl2 (absent)

Cimicifuga dahurica

17

26572

 

Circaeaster agrestis

21

28023

rps19, trnQ-UUG, trnL-UAG, rpl32

Clematis aethusifolia

23

31041

rps8, rpl14, rpl16, rps3, rpl22, rps19

Archiclematis alternata

23

31037

rps8, rpl14, rpl16, rps3, rpl22, rps19

Clematis fusca

24

31039

infA, rps8, rpl14, rpl16, rps3, rpl22, rps19

Clematis terniflora

24

31045

infA, rps8, rpl14, rpl16, rps3, rpl22, rps19

Coptis quinquesecta

17

26442

 

Delphinium anthriscifolium

17

25977

 

Delphinium ceratophorum

17

26560

 

Dichocarpum dalzielii

17

26535

 

Dichocarpum sutchuenense

19

27622

rpl22, rps19

Gymnaconitum gymnandrum

17

26140

 

Halerpestes sarmentosa

17

25057

 

Helleborus thibetanus

16

24999

rpl2 (absent)

Hepatica henryi

24

31039

infA, rps8, rpl14, rpl16, rps3, rpl22, rps19

Hydrastis canadensis

18

27032

rps19

Kingdonia uniflora

19

31109

ndhB (loss); rps19, ycf1, rps15

Megaleranthis saniculifolia

17

26608

 

Naravelia pilulifera

23

31054

rps8, rpl14, rpl16, rps3, rpl22, rps19

Nigella_damascena

17

25167

 

Oxygraphis glacialis

17

25094

 

Pulsatilla chinensis

24

31115

infA, rps8, rpl14, rpl16, rps3, rpl22, rps19

Ranunculus macranthus

17

25791

 

Ranunculus sceleratus

17

25302

 

Sinopodophyllum hexandrum

17

25950

 

Souliea vaginata

17

26533

 

Stephania japonica

17

24340

 

Thalictrum coreanum

17

26403

 

Thalictrum minus

17

26482

 

Thalictrum petaloideum

17

26480

 

Thalictrum tenue

17

26504

 

Trollius chinensis

17

26627

 

Trollius ranunculoides

17

26500

 
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