Table 1 Topology prediction of MecR1 from Staphylococcus aureus NRS70.
TopPred | HMMTOP | TMHMM | TMpred | DAS | ||
|---|---|---|---|---|---|---|
MecR1 Staphylococcus aureus NRS70 | ||||||
TM regions | 1 | 3–23 | 6–23 | 5–27 | 5–28 | 7–27 |
2 | 37–57 | 40–57 | 40–62 | 37–55 | 39–54 | |
3 | 105–125 | 105–122 | 103–125 | 105–125 | 106–125 | |
4 | 172–192 | 162–179 | — | 173–193 | — | |
5 | 216–236 | — | — | 214–236 | 220–228 | |
6 | 316–336 | — | 316–338 | 316–334 | 319–330 | |
