Table 1 Cross-resistant dose-response for the active epi-drugs. Compounds were screened for IC50 against 3D7, K1 and W2 asexual parasite strains using the SYBR Green I-based fluorescence assay. The resistance index (RI; italic) and selectivity index (SI) for each compound is shown. Compounds with SI > 10 are in bold. Results for all compounds are representative of three independent biological replicates with technical triplicates (n = 3, IC50 ± SEM).
From: Epigenetic inhibitors target multiple stages of Plasmodium falciparum parasites
Compound name | 3D7 | IC50 (μM) against P. falciparum strains | IC50 human cell line (μM)a | SI (based on 3D7 IC50) | |||
---|---|---|---|---|---|---|---|
K1 | W2 | ||||||
RI (K1/3D7) | RI (W2/3D7) | ||||||
3-Deazaneplanocin A | 0.0117 ± 0.0023 | 0.007 ± 0.004 | 0.60 | 0.0358 ± 0.0032 | 3.06 | 0.19 | 16 |
BIX01294 | 0.028 ± 0.006 | 0.047 ± 0.007 | 1.68 | 0.045 ± 0.006 | 1.61 | 11 | 393 |
UNC0638 | 0.0283 ± 0.0032 | 0.039 ± 0.005 | 1.38 | 0.05 ± 0.01 | 1.77 | 23 | 812 |
HC Toxin | 0.035 ± 0.013 | 0.019 ± 0.004 | 0.54 | 0.0291 ± 0.0016 | 0.83 | 0.037 | 1 |
TSA | 0.078 ± 0.008 | 0.066 ± 0.008 | 0.85 | 0.066 ± 0.005 | 0.85 | 0.2 | 2.6 |
ITF2357 | 0.17 ± 0.01 | 0.122 ± 0.028 | 0.72 | 0.178 ± 0.015 | 1.05 | 0.2 | 1.2 |
4-iodo-SAHA | 0.30 ± 0.07 | 0.40 ± 0.05 | 1.33 | 0.27 ± 0.05 | 0.90 | 1.1 | 3 |
SB939 | 0.32 ± 0.11 | 0.44 ± 0.10 | 1.38 | 0.30 ± 0.04 | 0.94 | 1.48 | 5 |
CAY10603 | 0.37 ± 0.08 | 0.367 ± 0.028 | 0.99 | 0.428 ± 0.023 | 1.16 | 10.8 | 29 |
M344 | 0.51 ± 0.08 | 0.29 ± 0.04 | 0.57 | 0.53 ± 0.04 | 1.04 | 2.3 | 4.6 |
Pyroxamide | 0.51 ± 0.14 | 0.50 ± 0.07 | 0.98 | 0.64 ± 0.15 | 1.25 | — | — |
SAHA | 0.71 ± 0.12 | 0.37 ± 0.04 | 0.52 | 0.43 ± 0.06 | 0.61 | 5 | 7 |
CAY10398 | 0.726 ± 0.005 | 0.2723 ± 0.0032 | 0.38 | 0.363 ± 0.030 | 0.50 | — | — |
Sinefungin | 0.94 ± 0.04 | 1.43 ± 0.16 | 1.52 | 0.949 ± 0.032 | 1.01 | — | — |
Ellagic acid | 1.9 ± 0.5 | 2.4 ± 1.2 | 1.26 | 3.25 ± 0.19 | 1.71 | 45 | 23.7 |
Tenovin-6 | 2.3 ± 0.4 | 4.33 ± 0.32 | 1.88 | 4.9 ± 1.2 | 2.13 | 6.09 | 2.65 |
Suberohydroxamic acid | 2.77 ± 0.18 | 5.8 ± 0.7 | 2.09 | 2.2 ± 0.6 | 0.79 | 50 | 18 |
CBHA | 3.2 ± 0.7 | 1.9 ± 0.3 | 0.59 | 0.77±0.04 | 0.24 | 1.8 | 0.56 |
Oxamflatin | 3.7 ± 0.9 | 4.7 ± 1.2 | 1.27 | 2.3 ± 0.6 | 0.62 | 0.25 | 0.07 |