Figure 5 | Scientific Reports

Figure 5

From: Single-molecular real-time deep sequencing reveals the dynamics of multi-drug resistant haplotypes and structural variations in the hepatitis C virus genome

Figure 5

The definition of structural variations (SVs) by Sniffles. The figure is adapted from the article of Sniffles32 with focus on the relationship between the reference genome sequence and the sample genome sequence with each SV32. Sniffles is able to detect 8 types of SVs, such as deletions, duplications, insertions, inversion, translocation, nested variation (inversion + deletion and duplication + inversion), and U-Turns (INVDUP). The red regions indicate regions where an SV occurs. The red points stand for the breakpoint of deletions.

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