Table 4 Re-docking validation for fragment docking using AutoDock.

From: Click Inspired Synthesis of Novel Cinchonidine Glycoconjugates as Promising Plasmepsin Inhibitors

Molecular fragment

Binding energy (K cal/ mol)

Number of H-bonds

Amino acid

Docking

Re-docking

Cm

−6.1

−6.1

2

VAL78

THR217

3a

−5.35

−5.4

1

ASP34

3b

−5.46

−5.46

2

ASP214

SER79

3c

−4.9

−5

2

PHE 16

ASP303

3d

−4.9

−4.9

2

VAL78

SER79

3f

−5.8

−5.76

2

ASP214

SER79

3g

−5.2

−5.2

2

GLY216

SER218

3h

−5.23

−5.23

2

SER79

ASP214

3i

−4.71

−4.7

2

VAL78

ASP34

3j

−5.39

−5.39

1

VAL78