Table 6 Information of virus-associated reads for viruses identified in sweet potato in Korea.

From: Sweet potato viromes in eight different geographical regions in Korea and two different cultivars

Index

Abbreviation

GJ

GS

HN

IC

IS

NS

YA

YJ

YJ-B

YJ-H

1

SPCFV

    

16

     

2

SPFMV

60

 

191

26392

2020

1902

 

13046

104115

50932

3

SPLV

 

3359

 

1582

    

6365

 

4

SPLCV

 

34027

 

4580

167

1518

 

4358

22140

17575

5

SPV2

 

3684

 

434

   

186

1737

5122

6

SPVC

1022

130595

1284

 

10400

  

2332

29625

27717

7

SPVG

   

841

4109

  

16331

317

3520

8

SPSMV

59

332

19

141

61

80

191

63

187

 

9

SPVF

 

667

 

292

      

10

SPVE

 

129306

 

49226

      
  1. To calculate the number of virus-associated reads, raw sequence reads were mapped on the identified virus genome using the BBMap program.
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