Table 1 Characteristics of deduced protein of Silicon transporter genes identified.
Gene Name | Deduced protein | Secondary Structure (%) | Number of Helices | TMHMM (TMHs) | Protter (TMHs) | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A.A. Length | MW (kDa) | pI | NPA/SPA Domain | Instability index | Stable or unstable | Alpha Helix | Beta Sheet | Beta Turns | Rando m Coil | ||||
EcLsi1 | 299 | 32.15 | 7.09 | NPA | 34.96 | Stable | 32.44 | 17.06 | 4.35 | 46.15 | 11 | 6 | 6 |
EcLsi2 | 473 | 50.34 | 8.52 | SPA | 34.84 | Stable | 51.16 | 15.64 | 4.65 | 28.54 | 17 | 10 | 10 |
EcLsi6 | 293 | 31.34 | 6.64 | NPA | 39.10 | Stable | 37.20 | 18.77 | 3.41 | 40.61 | 12 | 6 | 6 |
EcLsi2_1 | 431 | 46.30 | 5.78 | — | 42.26 | Unstable | 46.87 | 13.46 | 3.25 | 36.43 | 23 | 5 | 7 |
EcLsi2_2 | 556 | 60.26 | 5.96 | SPA | 39.05 | Stable | 47.84 | 15.65 | 4.68 | 31.83 | 23 | 9 | 10 |
EcLsi2_3 | 436 | 47.64 | 5.22 | — | 43.02 | Unstable | 49.31 | 10.32 | 4.13 | 36.24 | 18 | 6 | 7 |
EcLsi2_4 | 545 | 59.19 | 5.80 | SPA | 39.72 | Stable | 51.93 | 14.13 | 4.77 | 29.17 | 19 | 9 | 10 |
EcLsi2_5 | 447 | 48.71 | 5.32 | — | 42.10 | Unstable | 48.77 | 11.86 | 4.47 | 34.90 | 19 | 6 | 7 |
EcLsi3_6 | 518 | 55.92 | 6.01 | SPA | 36.88 | Stable | 47.88 | 12.74 | 5.02 | 34.36 | 22 | 8 | 9 |
EcLsi3_7 | 518 | 55.92 | 6.01 | SPA | 36.88 | Stable | 47.88 | 12.74 | 5.02 | 34.36 | 22 | 8 | 9 |
EcLsi3_8 | 519 | 55.93 | 6.01 | SPA | 37.39 | Stable | 47.40 | 14.26 | 5.20 | 33.14 | 23 | 9 | 11 |
EcLsi3_9 | 480 | 52.05 | 5.24 | — | 39.45 | Stable | 46.46 | 14.79 | 3.54 | 35.21 | 18 | 7 | 8 |
EcLsi1_10 | 162 | 17.04 | 6.18 | NPA | 27.91 | Stable | 45.06 | 21.60 | 5.56 | 27.78 | 7 | 5 | 5 |
