Table 3 Twenty most down-regulated genes with functional annotation during growth of R. microporus on latex.
Gene IDa | log2FCb | InterPro Hit IDc | InterPro Hit description | P value | FDR |
|---|---|---|---|---|---|
fgenesh1_pg.19_#_67 | −6.907 | IPR001138 | Zn(2)-C6 fungal-type DNA-binding domain | 8.567E-06 | 8.189E-04 |
estExt_fgenesh1_pg.C_3_t10061 | −6.691 | IPR001810 | F-box domain | 6.455E-05 | 2.889E-03 |
fgenesh1_kg.3_#_116 | −6.408 | IPR009071 | High mobility group box domain | 1.294E-04 | 4.529E-03 |
gm1.9245_g | −6.378 | IPR002523 | Mg2+ transporter protein | 1.737E-04 | 5.375E-03 |
estExt_Genemark1.C_210131 | −6.250 | IPR008030 | NmrA-like domain | 2.662E-04 | 7.038E-03 |
gm1.11294_g | −6.060 | IPR002575 | Aminoglycoside phosphotransferase | 1.371E-03 | 2.045E-02 |
estExt_Genemark1.C_120167 | −4.715 | IPR023378 | YheA | 4.676E-05 | 2.381E-03 |
e_gw1.25.73.1 | −4.325 | IPR006094 | FAD linked oxidase | 2.987E-04 | 7.544E-03 |
estExt_Genemark1.C_240010 | −4.318 | IPR002921 | Fungal lipase-like domain | 2.672E-04 | 7.043E-03 |
gm1.1019_g | −4.262 | IPR002048 | EF-hand domain | 2.963E-05 | 1.767E-03 |
CE350168_11990 | −3.731 | IPR003819 | Taurine catabolism dioxygenase TauD | 3.026E-05 | 1.767E-03 |
estExt_fgenesh1_pg.C_3_t10054 | −3.697 | IPR001128 | Cytochrome P450 | 4.287E-04 | 9.684E-03 |
fgenesh1_pg.13_#_14 | −3.663 | IPR001938 | Thaumatin | 6.251E-06 | 6.915E-04 |
gm1.5464_g | −3.605 | IPR000772 | Ricin B lectin domain | 2.218E-06 | 3.222E-04 |
gm1.9351_g | −3.544 | IPR009078 | Ferritin-like superfamily | 2.931E-03 | 3.187E-02 |
CE623133_924 | −3.475 | IPR001128 | Cytochrome P450 | 1.158E-05 | 1.014E-03 |
fgenesh1_kg.11_#_723 | −3.245 | IPR001138 | Zn(2)-C6 fungal-type DNA-binding domain | 3.337E-05 | 1.911E-03 |
e_gw1.5.1225.1 | −3.230 | IPR000719 | Protein kinase domain | 3.028E-03 | 3.261E-02 |
e_gw1.15.148.1 | −3.188 | IPR001128 | Cytochrome P450 | 8.441E-05 | 3.377E-03 |
gm1.5005_g | −3.125 | IPR007111 | NACHT nucleoside triphosphatase | 7.097E-09 | 4.553E-06 |
