Table 2 Genetic parameters in four sub-populations.

From: A new SNP genotyping technology Target SNP-seq and its application in genetic analysis of cucumber varieties

Subpop.

Ecotype

No. of Varieties

PIC

MAF

Ho

He

Inbreeding Coefficient

Average Differential Markers

Pop1A

South China type

78

0.241

0.171

0.171

0.327

0.477

52.4

Pop1B

North China type

105

0.175

0.122

0.161

0.442

0.637

38.6

Pop2A

Europe type

58

0.312

0.219

0.211

0.354

0.405

68.3

Pop2B

Xishuangbanna type

20

0.172

0.118

0.080

0.396

0.797

36.6

  1. Ho: observed heterozygosity; He: expected heterozygosity; MAF: minor allele frequency; PIC: polymorphic information content.
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