Table 1 Isolates sharing the highest nucleotide identity (%) with each segment of two representative influenza viruses found in GISAID database.
From: Highly pathogenic H5N6 avian influenza virus subtype clade 2.3.4.4 indigenous in South Korea
Virus | Gene segment | Virus with the highest nucleotide identity | Identity |
|---|---|---|---|
A/WD/Eumseong/22/2019 (H5N6) | PB2 | A/EM/Korea/W544/2016 (H5N6) | 100 |
PB1 | A/EM/Korea/W544/2016 (H5N6) | 99.91 | |
PA | A/DK/Korea/ES2/2016 (H5N6) | 100 | |
HA | A/DK/Korea/ES2/2016 (H5N6) | 99.94 | |
NP | A/EM/Korea/W544/2016 (H5N6) | 100 | |
NA | A/WS/Korea/Gangjin49_2/2016 (H5N6) | 99.78 | |
M | A/EM/Korea/W544/2016 (H5N6) | 100 | |
NS | A/EM/Korea/W544/2016 (H5N6) | 100 | |
A/WD/Chungju/01/2018 (H5N6) | PB2 | A/JC/Hyogo/2803E024C/2018 (H5N6) | 99.60 |
PB1 | A/JC/Hyogo/2803E027T/2018 (A/H5N6) | 99.61 | |
PA | A/MS/Shimane/3211A001/2017 (H5N6) | 99.76 | |
HA | A/MS/Shimane/3211A001/2017 (H5N6) | 99.82 | |
NP | A/TD/Shimane/3211TY001/2017 (H5N6) | 99.79 | |
NA | A/JC/Hyogo/2803E023C/2018 (A/H5N6) | 99.71 | |
M | A/JC/Hyogo/2803E024C/2018 (A/H5N6) | 99.79 | |
NS | A/MS/Shimane/3211A002/2017 (H5N6) | 99.88 |
