Table 1 Gene expression data; The C. albicans genes that were significantly affected by both fluconazole only and C12AHL only exposure compared to untreated controls [(Fluconazole vs Control) vs (C12AHL vs Control)]. Genes highlighted in blue are known to be associated with antifungal sensitivity/resistance. (http://www.candidagenome.org/).
From: Fluconazole resistance in Candida albicans is induced by Pseudomonas aeruginosa quorum sensing
Gene Name | Annotation | Fluconazole treated compared to control: log2FoldChange | Adjusted P value | C12AHL treated compared to control: log2FoldChange | Adjusted P value |
---|---|---|---|---|---|
CSH1 | Aldo-keto reductase | 3.36 | 5.11E-23 | 1.87 | 5.61E-07 |
C3_03460C_A | Protein of unknown function | 3.35 | 5.16E-23 | 3.19 | 4.58E-20 |
C1_01510W_A | Protein of unknown function | 2.78 | 1.81E-16 | 2.46 | 2.65E-12 |
C1_04010C_A IFD1/IFD6 alias | Protein with a NADP-dependent oxidoreductase domain | 2.67 | 1.06E-19 | 1.68 | 1.47E-07 |
LPG20 | Aldo-keto reductase family protein | 2.44 | 4.3E-13 | 1.65 | 8.38E-06 |
CRH11 | GPI-anchored cell wall transglycosylase | 2.30 | 7.62E-08 | −2.36 | 1.36E-07 |
WOR4 | Predicted C2H2 zinc finger protein | 2.09 | 7.17E-12 | 2.40 | 1.18E-14 |
NRG1 | Transcription factor/repressor | 1.86 | 1.93E-12 | 2.18 | 4.02E-16 |
IFD6 | Aldo-keto reductase | 1.75 | 6.62E-08 | 3.02 | 1.11E-21 |
SRR1 | Two-component system response regulator | 1.62 | 1.27E-06 | 2.24 | 1.98E-11 |
C2_01750C_A | Protein with a life-span regulatory factor domain | 1.33 | 8.99E-07 | 1.51 | 4.57E-08 |
RGS2 | Protein of RGS superfamily | 1.29 | 1.1E-07 | 1.39 | 3.28E-08 |
BCR1 | Transcription factor | 1.26 | 3.25E-07 | 1.21 | 3.28E-06 |
CR_10230W_A | Histone acetyltransferase activity | 0.85 | 3.82E-06 | 1.36 | 2.94E-14 |
CDR4 | Putative ABC transporter superfamily | −1.43 | 2.18E-08 | 1.70 | 6.09E-11 |
PHHB | Putative 4a-hydroxytetrahydrobiopterin dehydratase | −1.62 | 5.69E-07 | −1.72 | 2.87E-07 |
IFR2 | Zinc-binding dehydrogenase | −1.79 | 2.02E-08 | −1.78 | 8.07E-08 |
RME1 | Zinc finger protein | −1.95 | 4.98E-07 | 2.17 | 3.28E-08 |
ATX1 | Putative cytosolic copper metallochaperone | −2.22 | 8.01E-10 | 2.75 | 2.42E-14 |