Table 3 Gene expression data; The C. albicans genes that were significantly affected by both C12AHL only and C12AHL + fluconazole exposure compared to untreated controls [(C12AHL vs Control) vs (C12AHL + fluconazole vs Control)]. Genes highlighted in blue are known to be associated with antifungal resistance/sensitivity. (http://www.candidagenome.org/).
From: Fluconazole resistance in Candida albicans is induced by Pseudomonas aeruginosa quorum sensing
Gene Name | Annotation | C12AHL-Fluconazole treated compared to control: log2FoldChange | Adjusted P value | C12AHL treated compared to control: log2FoldChange | Adjusted P value |
---|---|---|---|---|---|
C3_03460C_A | Protein of unknown function | 3.45 | 3.54E-23 | 3.19 | 4.58E-20 |
IFD6 | Aldo-keto reductase | 3.00 | 2.14E-21 | 3.02 | 1.11E-21 |
UGT51C1 | UDP-glucose:sterol glucosyltransferase | 2.20 | 1.95E-19 | 2.38 | 1.45E-22 |
CRZ2 | C2H2 transcription factor | 2.30 | 2.41E-14 | 2.51 | 2.86E-17 |
ATX1 | Putative cytosolic copper metallochaperone | 2.74 | 3.92E-14 | 2.75 | 2.42E-14 |
ALK2 | N-Alkane inducible cytochrome P450 | 1.93 | 2.75E-13 | 1.63 | 1.09E-09 |
NRG1 | Transcription factor/repressor | 1.95 | 9.01E-13 | 2.18 | 4.02E-16 |
C1_01510W_A | Protein of unknown function | 2.41 | 1.41E-11 | 2.46 | 2.65E-12 |
CDR4 | Putative ABC transporter superfamily | 1.76 | 1.68E-11 | 1.70 | 6.09E-11 |
YOR1 | ABC-type plasma membrane transporter | 1.35 | 3.45E-11 | 1.41 | 2.33E-12 |
WOR4 | Predicted C2H2 zinc finger protein | 2.08 | 6.53E-11 | 2.40 | 1.18E-14 |
ADA2 | Zinc finger and homeodomain transcriptional coactivator | 1.51 | 8.98E-11 | 1.67 | 2.43E-13 |
C6_02100W_A | Secreted protein | −3.73 | 1.15E-10 | −3.54 | 9.31E-10 |
OPT3 | Oligopeptide transporter | 2.16 | 1.39E-10 | 2.15 | 1.60E-10 |
SRR1 | Two-component system response regulator | 2.15 | 1.81E-10 | 2.24 | 1.98E-11 |
C7_04090C_A | Predicted mitochondrial cardiolipin-specific phospholipase | 2.33 | 2.33E-10 | 2.35 | 1.59E-10 |
C1_09210C_A | Putative transporter | 1.72 | 2.42E-10 | 1.47 | 8.96E-08 |
C3_05450C_A | Protein of unknown function | 2.38 | 4.54E-10 | 2.53 | 2.17E-11 |
ZCF1 | Zn(II)2Cys6 transcription factor | 1.43 | 6.29E-10 | 1.59 | 2.33E-12 |
RFG1 | HMG domain transcriptional repressor | 1.81 | 7.32E-10 | 1.94 | 3.12E-11 |
MOH1 | Ortholog of S. cerevisiae Moh1 | 1.61 | 2.14E-09 | 1.68 | 2.64E-10 |
CR_09100C_A | Aldo-keto reductase | 2.30 | 4.70E-09 | 2.35 | 1.36E-09 |
FBA1 | Fructose-bisphosphate aldolase | −1.79 | 5.31E-09 | −1.64 | 8.92E-08 |
EFG1 | bHLH transcription factor | 1.88 | 7.64E-09 | 1.97 | 9.31E-10 |
CR_10230W_A | Ortholog(s) have histone acetyltransferase activity | 1.07 | 8.15E-09 | 1.36 | 2.94E-14 |
HSP78 | Heat-shock protein | 2.23 | 1.33E-08 | 2.22 | 1.27E-08 |
RPN4 | C2H2 transcription factor | 1.34 | 1.56E-08 | 1.40 | 3.13E-09 |
SNQ2 | Protein similar to S. cerevisiae Snq2p transporter | 1.74 | 1.56E-08 | 1.55 | 6.73E-07 |
CR_06140W_A | Protein of unknown function | 1.96 | 1.56E-08 | 1.98 | 1.08E-08 |
C7_00770W_A | Protein of unknown function | 2.19 | 1.73E-08 | 1.81 | 6.81E-06 |
HSP104 | Heat-shock protein | 2.54 | 1.83E-08 | 2.47 | 3.99E-08 |
GOR1 | Ortholog(s) have glyoxylate reductase activity | 2.16 | 1.86E-08 | 2.00 | 2.37E-07 |
IFR2 | Zinc-binding dehydrogenase | −1.82 | 4.01E-08 | −1.78 | 8.07E-08 |
AAF1 | Possible regulatory protein | 2.13 | 5.63E-08 | 2.18 | 2.21E-08 |
YIM1 | Protein similar to protease of mitochondrial inner membrane | 1.95 | 6.00E-08 | 2.00 | 2.04E-08 |
PHHB | Putative 4a-hydroxytetrahydrobiopterin dehydratase | −1.78 | 1.04E-07 | −1.72 | 2.87E-07 |
ERO1 | Ortholog of S. cerevisiae Ero1 | 1.91 | 1.20E-07 | 2.00 | 1.82E-08 |
MNN42 | Protein of unknown function | 1.25 | 1.48E-07 | 1.43 | 6.88E-10 |
HAL9 | Putative Zn(II)2Cys6 transcription factor | 1.35 | 2.48E-07 | 1.40 | 5.22E-08 |
ADH3 | Putative NAD-dependent (R,R)-butanediol dehydrogenase | 3.05 | 2.81E-07 | 3.25 | 2.36E-08 |
INO2 | Transcriptional activator | 1.76 | 3.13E-07 | 1.92 | 1.24E-08 |
CSH1 | Aldo-keto reductase | 1.91 | 3.78E-07 | 1.87 | 5.61E-07 |
C6_00290W_A | Protein of unknown function | 1.54 | 4.63E-07 | 1.67 | 2.04E-08 |
GRP2 | Methylglyoxal reductase | 2.50 | 4.86E-07 | 2.62 | 8.07E-08 |
ISA1 | Putative mitochondrial iron-sulfur protein | 1.39 | 7.93E-07 | 1.55 | 1.62E-08 |
RME1 | Zinc finger protein | 1.98 | 9.00E-07 | 2.17 | 3.28E-08 |
C1_04010C_A | Protein with a NADP-dependent oxidoreductase domain | 1.57 | 1.54E-06 | 1.68 | 1.47E-07 |
GAL102 | UDP-glucose 4,6-dehydratase | 1.85 | 1.54E-06 | 2.05 | 3.84E-08 |
C5_04030W_A | Protein of unknown function | 1.85 | 2.15E-06 | 2.08 | 3.99E-08 |
C4_03020W_A | Putative mitochondrial GTPase | 0.98 | 2.64E-06 | 1.18 | 4.87E-09 |
ALS7 | ALS family protein | 0.95 | 2.83E-06 | 1.12 | 1.07E-08 |
MNN12 | Predicted alpha-1,3-mannosyltransferase | −1.90 | 2.89E-06 | −1.93 | 1.55E-06 |
C3_02630C_A | Protein of unknown function | 1.20 | 3.87E-06 | 1.42 | 1.29E-08 |
SIS1 | Putative Type II HSP40 co-chaperone | 1.98 | 3.87E-06 | 1.94 | 5.25E-06 |
LPG20 | Aldo-keto reductase family protein | 1.71 | 3.87E-06 | 1.65 | 8.38E-06 |
HSP90 | Essential chaperone | 1.71 | 3.87E-06 | 1.85 | 2.86E-07 |
MHP1 | Protein similar to S. cerevisiae Mhp1p | 1.10 | 3.93E-06 | 1.09 | 4.69E-06 |
C3_00360W_A | Protein of unknown function | 1.43 | 4.78E-06 | 1.88 | 2.21E-10 |
C1_03990W_A | Ortholog(s) have proteasome binding activity | 1.64 | 6.48E-06 | 1.95 | 2.07E-08 |
CR_06960W_A | Ortholog(s) have ATP binding, DNA replication origin binding activity | 1.29 | 6.48E-06 | 1.35 | 1.73E-06 |
C1_01130W_A | Putative ubiquitin ligase complex component | 1.06 | 7.23E-06 | 1.09 | 2.80E-06 |
RGS2 | Protein of RGS superfamily | 1.17 | 7.97E-06 | 1.39 | 3.28E-08 |
CR_07480W_A | Predicted auxin family transmembrane transporter | 1.02 | 9.33E-06 | 1.22 | 2.41E-08 |
C4_02740W_A | Protein of unknown function | 1.48 | 9.33E-06 | 1.54 | 2.80E-06 |