Table 1 Characteristics of the MdYUCCA gene family in apple.
From: Genome-wide identification and expression profiling of the YUCCA gene family in Malus domestica
Gene name | GDDH13_1-1 | NCBI | GDR v3.01 | Location | Strand | Length (aa) | pI | MW |
|---|---|---|---|---|---|---|---|---|
MdYUCCA2a | MD15G1184800 | XM_008339168.1 | Chr15:14580569..14584004 | − | 437 | 8.8 | 48.73 | |
MdYUCCA2b | MD01G1067600 | XM_008388239.1 | Chr01:17093902..17096602 | − | 436 | 9.05 | 48.61 | |
MdYUCCA2c | MD02G1046700 | Chr02:3719433..3722141 | − | 381 | 8.96 | 42.55 | ||
MdYUCCA3a | MD16G1232600 | XM_008344329.1 | Chr16:23900387..23902351 | + | 426 | 9.08 | 47.69 | |
MdYUCCA3b | MD13G1227000 | Chr13:22205775..22207631 | + | 338 | 8.86 | 37.08 | ||
MdYUCCA4a | MD08G1139500 | XM_008368432.1 | Chr08:13470642..13472655 | − | 410 | 9.06 | 45.29 | |
MdYUCCA4b | MD15G1117200 | XM_008395801.1 | Chr15:8337905..8340244 | − | 411 | 9.19 | 45.35 | |
MdYUCCA6a | MD15G1098700 | XM_008395672.1 | Chr15:6833888..6838031 | − | 460 | 9.05 | 51.04 | |
MdYUCCA6b | MD08G1119300 | XM_008379894.1 | Chr08:10869749..10873628 | − | 448 | 9.26 | 49.79 | |
MdYUCCA8a | MD10G1172800 | XM_008367718.1 | MDP0000262982 | Chr10:26514039..26515625 | − | 423 | 8.72 | 47.42 |
MdYUCCA8b | MD05G1184800 | Chr05:31306814..31308517 | − | 423 | 8.72 | 47.37 | ||
MdYUCCA10a | MDP0000138851 | XM_008370693.1 | MDP0000138851 | Chr03:31907169..31927564a | + | 382 | 9.01 | 42.68 |
MdYUCCA10b | MD15G1133800 | Chr15:9725184..9729059 | − | 563 | 9.88 | 64.48 | ||
MdYUCCA10c | MD00G1056000 | XM_008370695.1 | MDP0000208234 | Chr00:10506121..10507905 | + | 381 | 8.96 | 42.50 |
MdYUCCA11a | MD10G1010300 | XM_008366814.1 | MDP0000259265 | Chr10:1431009..1433012 | + | 383 | 8.78 | 43.01 |
MdYUCCA11b | MD10G1010000 | XM_008380434.1 | MDP0000582079 | Chr10:1378296..1380232 | + | 380 | 8.56 | 41.98 |
MdYUCCA11c | MD15G1274600 | MDP0000686821 | MDP0000686821 | Chr15:24088780..24090298 | − | 385 | 9.09 | 42.85 |
MdYUCCA11d | MD10G1010200 | Chr10:1404169..1405726 | + | 365 | 8.96 | 40.67 | ||
MdYUCCA11e | MD10G1010100 | Chr10:1386074..1387630 | + | 365 | 8.96 | 40.67 | ||
MdYUCCA11f | MDP0000209681 | XM_008350515.1 | MDP0000209681 | Chr10:956025..957926a | − | 365 | 8.88 | 40.65 |
